| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2518 |
|---|
| Symbol | |
|---|
| ID | 3704713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2866588 |
|---|
| End bp | 2867604 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637738997 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_344501 |
|---|
| Protein GI | 77165976 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCT ATTATGATAA AGATTGTGAT CTATCCTTGA TCCAAGGTAT GCGAGTTGCC
ATTATTGGCT ATGGCTCCCA AGGGCATGCT CATGCGAATA ACCTTAAGGA CTCGGGTGTG
GATGTGGTGG TTGGCCTGCG CTCCGGTTCG ACTTCTGTGG CTAAAGCCGA GAATGCGGGT
TTGACCGTTT TACCTATCGA GGCAGCGATT AAGGAAGCGG ATCTGGCGAT GATTTTAGCG
CCGGATGAGC ACCAGTCAAA ACTTTATCAG GAAGATATCG AGCCTCACCT GAAGCAAAAC
GCTACATTAG CCTTTGCCCA CGGTTTTAAT ATCCACTTTA GACAAATTGA GCCGCGCGCT
GATCTCGATG TCATCATGGT GGCTCCCAAG GGGCCTGGGC ATCTGGTGAG ATCCACGTAT
ACTCAAGGAG GGGGGGTGCC CTCCTTGATC GCTGTACATC AGGATGTTTC TACTAAGGCG
AGAGAGATCG CTTTGTCCTA CGCCGCAGCA AATGGAGGCG GGCGAGCGGG GATTATCGAG
ACGGCTTTTA GAGAAGAGAC GGAAACAGAC CTTTTTGGGG AGCAGGTTGT TCTTTGTGGA
GGAGTGACAG CGTTGGTGCA AGCAGGTTTC GAAACACTGG TGGAAGCAGG GTATGCGCCC
GAAATGGCCT ATTTTGAATG TTTGCACGAG CTTAAGCTTA TTGTCGACCT CATGTACGAA
GGCGGTATCG CTAATATGCG TTATTCCATC TCTAATACCG CTGAATATGG TGATTTTACT
CGTGGCCCAC GAATTATCGA TGATAAAACC AAAACGGAGA TGCGCCGTAT CCTTAGTGAG
ATCCAAAGTG GTGAGTTTGC CCGTGAATTT ATTCTGGAAA ACCAAGCGGG TGCCCCTACC
CTTAAGGCAA AACGGCGCTT AGGCCAAGAG CATCTAATTG AACAAGTCGG TGAAAGATTG
AGATCAATGA TGCCGTGGAT TGGGAAAAGC CGTATTGTGG ATAAAAGTAA AAACTAG
|
|---|
| Protein sequence | MNIYYDKDCD LSLIQGMRVA IIGYGSQGHA HANNLKDSGV DVVVGLRSGS TSVAKAENAG
LTVLPIEAAI KEADLAMILA PDEHQSKLYQ EDIEPHLKQN ATLAFAHGFN IHFRQIEPRA
DLDVIMVAPK GPGHLVRSTY TQGGGVPSLI AVHQDVSTKA REIALSYAAA NGGGRAGIIE
TAFREETETD LFGEQVVLCG GVTALVQAGF ETLVEAGYAP EMAYFECLHE LKLIVDLMYE
GGIANMRYSI SNTAEYGDFT RGPRIIDDKT KTEMRRILSE IQSGEFAREF ILENQAGAPT
LKAKRRLGQE HLIEQVGERL RSMMPWIGKS RIVDKSKN
|
|---|
| |