Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2516 |
Symbol | |
ID | 3704711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2863971 |
End bp | 2865506 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738995 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_344499 |
Protein GI | 77165974 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA AATTAATCGT TTTCGATACG ACTTTACGGG ACGGTGAACA AAGCCCCGGT GCTTCCATGA CTCGGGAAGA GAAGGTGCGG ATCGCTAAAG CCTTGGAACG TATGAGAGTC GATGTGATTG AGGCGGGCTT TCCAGTAGCC AGCCAAGGTG ATTTTGAAGC GGTACAAGCG GTGGCTAGAA GTGTGCGGGA GAGCACGGTG TGTGGTTTAG CCCGGGCGCT CGGGGCAGAT ATTGATCGTG CTGGCGAGGC TTTGGCGGAG GCCGAGTCTG CGCGAATTCA TACTTTTATT GCGACTTCGC CTATTCATAT GAAAAGGAAA CTCCGGATGG AGCCGGACCA AGTCCTAGAG CATGCCGTTA AAGCCGTGAA ACGGGCGAGA GAATATACCG ATGATGTGGA ATTTTCCCCC GAAGATGCAG GCCGTTCAGA GATCGAATTT CTATGCCGGA TTTTGGAAGC TGTTATTGCT GCTGGTGCCC GGACCGTCAA TATCCCTGAT ACTGTAGGCT ACAATCTACC GGAGCAGTTT GCTCAACTTA TCCGTACTCT GCGTGAGCGG GTATCAAACT CGGATAAAGC TATTTTCTCA GTCCACTGCC ATAATGATCT AGGCATGGCG GTGGCTAATT CTTTGGCTGC CGTAATGAGT GGCGCCCGAC AGGTAGAATG TACCATTAAT GGTCTGGGGG AGCGGGCTGG CAATGCTGCT CTTGAGGAGG TGGTCATGGC GGTCCGCACT CGCCAAGATT CTTTTCCTTG CGATACTAAT GTCGATATCA GCCAAATTGT TCCCACGTCT CGTTTAGTCT CGGGCATTAC CGGCTTTTCC GTGCAGCCCA ATAAGGCTAT TGTGGGGGCC AATGCCTTTG CCCACGCATC AGGCATTCAT CAGGATGGCG TGCTCAAGGA ACGCCAAACC TATGAGATTA TGAGTGCAGA AGACGTGGGT TGGCATGCTA ATCAAATGAT CCTTGGCAAG CATTCGGGAC GCAACGCGTT CCGGGCCCGT TTACGGGAAT TGGGTATTGA GCTTGAGACC GAGGAAGAAT TAAATGCTGC TTTCCAGCGT TTCAAGGAAC TAGCGGATAA AAAACATGTG ATCTATGATG AGGATCTCCA GGCGCTGGTA ACCGATGCTA ACTTGGCCGC TGAAAATGAG CGCTTCAAAC TCTCATGGCT TAAGGTGGTT TCGGAAACAG GAGAAACCGC AATAGCGTCT GTCACCTTAA GTGTGGATAG TATAGAGCGG CAGGCATCCG CTCCCGGGAG CGGACCGGTG GATGCTGCTT ATAAAGCTAT TGATTCTATT CTTCAGAGTA ATACGGAATT ACTGCTTTAT TCAGTAAATA GTATTACTAG CGGCACGGAT GCCCAGGGAG AGGTAACGGT TCGGCTGAAG AAAAATGGGC GCATTGCAAA CGGTCAGGGT GCGGATACAG ATATTGTGAT GGCCTCGGCC AAGGCTTACG TCAATGCTTT AAACAAGATT CTATACCCAG TAGAGCGGGC CTATCCCCAG GTTTGA
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Protein sequence | MKDKLIVFDT TLRDGEQSPG ASMTREEKVR IAKALERMRV DVIEAGFPVA SQGDFEAVQA VARSVRESTV CGLARALGAD IDRAGEALAE AESARIHTFI ATSPIHMKRK LRMEPDQVLE HAVKAVKRAR EYTDDVEFSP EDAGRSEIEF LCRILEAVIA AGARTVNIPD TVGYNLPEQF AQLIRTLRER VSNSDKAIFS VHCHNDLGMA VANSLAAVMS GARQVECTIN GLGERAGNAA LEEVVMAVRT RQDSFPCDTN VDISQIVPTS RLVSGITGFS VQPNKAIVGA NAFAHASGIH QDGVLKERQT YEIMSAEDVG WHANQMILGK HSGRNAFRAR LRELGIELET EEELNAAFQR FKELADKKHV IYDEDLQALV TDANLAAENE RFKLSWLKVV SETGETAIAS VTLSVDSIER QASAPGSGPV DAAYKAIDSI LQSNTELLLY SVNSITSGTD AQGEVTVRLK KNGRIANGQG ADTDIVMASA KAYVNALNKI LYPVERAYPQ V
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