Gene Noc_2500 details

Gene Information

• Locus tag: Noc_2500
• ID: 3704385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 2844990
• End bp: 2845553
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637738979
• Product: hypothetical protein
• Protein accession: YP_344483
• Protein GI: 77165958

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000623369
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG TACTACTTAG CTGCCTTGTA TCGTTTGGAT TATTGTTGCT AAATACTTCC 
GCCATGGCCC ATGGGGGAGG AGGAATTGAA ACAGATCAGT GCGTTGTCAA TATCGGTAAT 
TACCGAATGC ATTTTTCTGC TTACCAACCG GAAACTTCTG GTGGTGAAGA GCTGTGCTGG 
GACTTGCCGA TGACGGGAAG CACCATTTTA GTGTTTGATT TAGTGGATAG GATATTGCGT 
GATCGGCCGG TTGAGGTTCG GATCGTTGAA GAGCAGAAAA CGGCCGCTGG CCCGTCAAAT 
TATAATCCCA TAGTAGAGCG TCCGGTTCAA AAATATCCAA AGGGAACTAT TGAGCTTGAT 
ACCGATTTTA CCAAAGCAGG AGAATACACT GCGGTAGTTA TTCTTGGTGG TGATCAACCG 
ATGGTCTTCA AAGCACCTCT TCGAGTGGGT CTCCAGGGAG AGCAGACCGT TCAGTGGATC 
GCCTCGATCG CTGGCGGTGC TCTTATTCTG GGGCTTATTT TTTGGTATAG TCGCCGTGGC 
GGAAAAGAGG CCAAGGCATC CTAG 

 

Protein sequence

MKKVLLSCLV SFGLLLLNTS AMAHGGGGIE TDQCVVNIGN YRMHFSAYQP ETSGGEELCW 
DLPMTGSTIL VFDLVDRILR DRPVEVRIVE EQKTAAGPSN YNPIVERPVQ KYPKGTIELD 
TDFTKAGEYT AVVILGGDQP MVFKAPLRVG LQGEQTVQWI ASIAGGALIL GLIFWYSRRG 
GKEAKAS