| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2496 |
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| Symbol | trpD |
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| ID | 3704381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2841760 |
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| End bp | 2842776 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738975 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_344479 |
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| Protein GI | 77165954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0780472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATTC AAACCGCCCT TCGTACCGTT ACCACGAGGC GTAACCTCAC CAGTGAGGAA
ATGACATCGG TCATGAATCT CATCATGAGT GGCCAAGCAA CCCCCGCGCA GATTGGCGGC
TTGCTTATTG GGCTTCGGAT GAAAGGAGAA ACGGTGGAAG AAATTGCTGC TGCCGCCAGG
GTGATGAGGG AATTGGCGAC TAAAGTGACA GTAACAGGCC CCCACCTCGT TGATACCTGC
GGTACTGGTG GGGATGGCGC CAATACTTTC AATATTTCGA CAGCCAGCGC TTTTGTTGTT
GCCGCGGCAG GAGGAAGAGT CGCCAAACAT GGCAACCGTT CTGTCTCCAG CCAATGTGGC
AGTGCTGATG TGCTTGAAGC AGCCGGTATT AAACTCGAAC TTACCCCCGA ACAGATTGCT
CGCTGTATTG AAGAACTTGG CGTAGGATTT CTGTTCGCCC CTTGCCACCA TAGCGCCATA
AAATTCACTA TAGCTCCACG GCGGGAAATG GGGATTCGCA CTTTATTTAA TCTCTTAGGG
CCTCTAACTA ACCCGGCCCA TATTCCTAAT CAAGTAGTAG GGGTCTTTAG TGACGAATGG
CTGGAGCCAC TTGCTTGGGT TCTGCACCGT TTAGGCTGCC AGCATGTACT TGTTGTCCAT
GCCAAAGATG GTCTGGATGA AATTAGTATT GGAGCTGAAA CTCAGATCGC TGAATTAAGA
GATGGGGCTG TTACAAGTTA TTTCATCACA CCCGAGCAAT TTGGCATCGA GCGGGTTTCC
ATCAGTTCTC TGGCCGTTAA CAGTACGCAA GAAAGTCTCA ATATTTTACG CTCCGTTCTA
GCAAACCAGC CCAGCCCAGC CCGTGATATC GTCGCTTTGA ACGCGGGGGC AGCTATCTAT
GCAGCCAATC TAACTCCTAC GCTGGAAAGA GGGGTAAAGA GAGCATTAAA AGTTCTCTCC
GAAGGCAGAG CCCAAGAGAA ATTAGCCGCT TTAATTACAT TTACCCAAGC CTGTTAG
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| Protein sequence | MDIQTALRTV TTRRNLTSEE MTSVMNLIMS GQATPAQIGG LLIGLRMKGE TVEEIAAAAR
VMRELATKVT VTGPHLVDTC GTGGDGANTF NISTASAFVV AAAGGRVAKH GNRSVSSQCG
SADVLEAAGI KLELTPEQIA RCIEELGVGF LFAPCHHSAI KFTIAPRREM GIRTLFNLLG
PLTNPAHIPN QVVGVFSDEW LEPLAWVLHR LGCQHVLVVH AKDGLDEISI GAETQIAELR
DGAVTSYFIT PEQFGIERVS ISSLAVNSTQ ESLNILRSVL ANQPSPARDI VALNAGAAIY
AANLTPTLER GVKRALKVLS EGRAQEKLAA LITFTQAC
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