Gene Noc_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2492 
Symbol 
ID3704377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp2838143 
End bp2838814 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID637738971 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_344475 
Protein GI77165950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATT ATAAAATTGC CCCTTCTATC CTATCAGCCG ATTTCGCCCG CTTGGGGGAA 
GAAGTGACTG CAGTATTAGA AGCGGGTGCC GATATGGTGC ATTTCGATGT AATGGATAAC 
CATTATGTCC CAAATCTAAC TATCGGCCCT CTCGTCTGCG AAGCCCTACG CAAACATGGC 
ATCACCGCTG ATATCGACGT TCATCTCATG GTAAAGCCAG TGGATCGAAT CGCCCCTGAT 
TTTGCCAAAG CGGGGGCAAA TTATATTACT TTTCATCCGG AAGCTTCCGA ACATATTGAC 
CGAACTCTAC AGCTAATCCG CGATGAGGGC TGCAAATCCG GCTTGGTATT CAATCCAGCG 
ACTTCCCTTG ATTATCTCAA ATACGTCATA GATAAAGTGG ATATGGTGCT TATCATGTCG 
GTGAATCCAG GTTTTGGTGG GCAAAAGTTC ATCCCCACGG CGCTTGACAA ACTGCGCGAA 
GCACGGCGGA TTATTGATGC CAGCGGCTAC CCTATCCGCC TTGAAATTGA TGGAGGTATC 
AAGATAGATA ATATCCAGCA AGTTGCAATG GCGGGAGCAG ATACCTTTGT GGCGGGTTCC 
GCTATCTTCC AAAGTGAAAA CTATAAGACC ACCATTGGCG AGATGCGCGC CGAGCTAGCC 
AAGGTAGGAT AA
 
Protein sequence
MANYKIAPSI LSADFARLGE EVTAVLEAGA DMVHFDVMDN HYVPNLTIGP LVCEALRKHG 
ITADIDVHLM VKPVDRIAPD FAKAGANYIT FHPEASEHID RTLQLIRDEG CKSGLVFNPA 
TSLDYLKYVI DKVDMVLIMS VNPGFGGQKF IPTALDKLRE ARRIIDASGY PIRLEIDGGI 
KIDNIQQVAM AGADTFVAGS AIFQSENYKT TIGEMRAELA KVG