| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2488 |
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| Symbol | |
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| ID | 3704373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2833710 |
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| End bp | 2835050 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738967 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_344471 |
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| Protein GI | 77165946 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGGGA TCAGTGAGGC CTGGCAGCCC TATGTGGATT CCTATGCCCG CCTGGAACCG
GATCTGGCGG GGGCGAATCT ACCCTGGCTG CGAGAATTAC GCCAGCAGGC ATTGGCCCGT
TTTATCTCCC TCGGCTTTCC TGGTCTCAAG AATGAGGATT GGAAATATAC GCGAGTCCGT
GCGCTGGCCG AGACTGCATT TAACTCGGCG GTTTCTTCAT CGGTAGCGGT CAGTTTAGAG
CAATGTCAAA GGTATTTTTT AGCAGAGACG CCCTGTTTTC GGTTGGTATT TGTTGATGGT
TGCTTTGCTC CGGGGTTATC AGAGATTGAA GATCTCCCGG CTGGTACGGT GGTGGGCAAT
TTAGCCGGCT GTTTCAAACA GCAGGGGGAA AGCCTGCGCG GGGTATTGGC CAGTTATGCG
GACTATCAAA ACCAGCCTTT CACCGCGCTT AATACTGCCT TCATGGCCGA TGGCGCTTAT
CTTTATTTAC CCCCCAGGAC CGTACTGGCC AAGCCGGTAC ATCTGATATT CCTGACTACG
GGGCGTAGCG AAGCCGTCGT GACTCACTCC CGTAATTTGA TAGTTCTCGA GCCGGAGAGT
GAACTGACGG TTATTGAGCA CTATGCTGGG TTAAATGATG CCGTATATTT CACGAATACG
GTCACCGAAA TAGCCGCGGG AAAGGGGGCT AATGTTGAGC ATATCAAATT GCAAGAGGAA
TCGGCTAAAA GCTTTCATAT TGCTACGATA CAGGTCCAGC AGGAACAGGA TGCGCAGTTT
CTTTCCCGTA ATCTGGCTTT GGGGGGGCGG TTAGCCCGCA ACGATATCAA TAGCGTATTG
GCAGGGGAGG GCGCCGGGTG CATTTTGGAG GGACTCTATG TTTTAGATGG TGTACGTCAC
GTAGATAACC ATACGAGAGT TGACCATCAA CAGCCACATA CCACTAGCCA GGAATTCTAC
AAAGGAATTT TAGATGGTAA ATCGCGGGCA GTCTTTAATG GCAAAGTGAT TGTTCACCCT
CATGCGCAAA AAGCGGATGC CCGCCAGGCC AACCGCAATT TGCTGCTGTC TGAAGGGGCT
GAAGTCGATA CCAAACCAGA ACTTGAAATC TACGCTGACG ATGTTAAGTG TGCTCATGGG
GCCACGGTCG GACAATTGGA TAAAGATCAA ATTTTCTATC TTCGCTCCCG CGGGATGGAA
GAGGATGCAG CGCGCCAGCT CTTGACCTAT GCTTTTGTCG AAGAAATTGT TAGGCGCATC
AAACTACGTC CTATCCGCGC CCGTATCGAA CATAGATTAA GCGCACAATT TTCTGAACCA
CAGCGCAAGG AGGTGGGTTG A
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| Protein sequence | MKGISEAWQP YVDSYARLEP DLAGANLPWL RELRQQALAR FISLGFPGLK NEDWKYTRVR
ALAETAFNSA VSSSVAVSLE QCQRYFLAET PCFRLVFVDG CFAPGLSEIE DLPAGTVVGN
LAGCFKQQGE SLRGVLASYA DYQNQPFTAL NTAFMADGAY LYLPPRTVLA KPVHLIFLTT
GRSEAVVTHS RNLIVLEPES ELTVIEHYAG LNDAVYFTNT VTEIAAGKGA NVEHIKLQEE
SAKSFHIATI QVQQEQDAQF LSRNLALGGR LARNDINSVL AGEGAGCILE GLYVLDGVRH
VDNHTRVDHQ QPHTTSQEFY KGILDGKSRA VFNGKVIVHP HAQKADARQA NRNLLLSEGA
EVDTKPELEI YADDVKCAHG ATVGQLDKDQ IFYLRSRGME EDAARQLLTY AFVEEIVRRI
KLRPIRARIE HRLSAQFSEP QRKEVG
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