Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2479 |
Symbol | |
ID | 3704617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2824437 |
End bp | 2825576 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637738958 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_344462 |
Protein GI | 77165937 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0654086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACG TGGTTCATGT CATCACCGGA TTAAATGTGG GAGGGGCGGA GAGAACCTTG CTTAGATTGT TAGCCAATCG AACTGCATCG CGCTTTAATC CTAGTGTGAT TTCTCTGCTG GATAAAGGAG TTATAGGCCC TCAGATCCAA TCCCTAGGAG TACCAGTATA TCCCCTGGGG ATGAAGCGAG GTATTCCGGG GCCCAGAGTT TTAATCGATT TGCGCCGCCT TCTCAAAAAA CTCGACCCCG ATGTGATTCA AGGTTGGATG TATCATGGCA ATCTAGCGGC GACTGTAGCG GCCTCATCCC TAGGGCGGCG AGTTCCGGTG TTGTGGAATA TCCGGCAGTC TCTCTATGGG CTGGCAAAAG AACGGTGGCT TACCCGGCAA GTGATTTATG GGAGTGCGTG GCTCTCCAGA TCGCCGAAGA TTATTCTTTA TAATAGTAAA ACCAGCGCCT CGCAGCATGA GGCGATGGGG TTTAAGCCCC AGAAGACCCG GATTATCCCC AATGGCTTCG ATTGTAATGA ATATTACCCT GATAAAAGAA TGAGAGAGCA GGTAAGAAAA GAGCTAGAAA TTCCGCTTAA TACCCTCTTG ATTGGGCTGA TTGCACGTTA TCATCCCATG AAGGATCACT CGAATTTTCT GCGGGCAGCT GCGGAACTCA TGAAGGCAGA GGAAGGAATG AGGATTGCTT TTCTATTAGC CGGGCGGGGT ATCGACCTGC CTAATGGTCC CCTAATCGAG CTTATTGGCC GGTTAGGTTT AGGCTCAAAA GTGTATTTGC TGGGGGAGCG GCAGGATATT TCTAGGCTCA TGATGGCATT GGATATTGCC ACCGTCGCGT CGGCATGGGG GGAGGGTTTT CCTAACGTGT TAGGTGAGGC AATGGCTTGC AGTATACCTT GTGTCGCCAC GGATGTAGGA GATTCAGCCT ATCTCATTGC GGATACGGGC AAAATCGTGC CACCTAAGAA CCCTCAGGCT CTAGCCGCCG CCTGGCAAGC GTTAATCGGG GTAGGAGTCA AGGGTCGTAA AGGATTAGGT GAGAAAGCCC GTAGGCGTAT TGCTGAGCAT TTTAATCTCT CGGAAATCGT ACACCAGTAT GAGCAATTGT ACCTGGAAGT GACCCCTTAA
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Protein sequence | MINVVHVITG LNVGGAERTL LRLLANRTAS RFNPSVISLL DKGVIGPQIQ SLGVPVYPLG MKRGIPGPRV LIDLRRLLKK LDPDVIQGWM YHGNLAATVA ASSLGRRVPV LWNIRQSLYG LAKERWLTRQ VIYGSAWLSR SPKIILYNSK TSASQHEAMG FKPQKTRIIP NGFDCNEYYP DKRMREQVRK ELEIPLNTLL IGLIARYHPM KDHSNFLRAA AELMKAEEGM RIAFLLAGRG IDLPNGPLIE LIGRLGLGSK VYLLGERQDI SRLMMALDIA TVASAWGEGF PNVLGEAMAC SIPCVATDVG DSAYLIADTG KIVPPKNPQA LAAAWQALIG VGVKGRKGLG EKARRRIAEH FNLSEIVHQY EQLYLEVTP
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