| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2466 |
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| Symbol | |
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| ID | 3704604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2812129 |
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| End bp | 2812707 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637738945 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_344449 |
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| Protein GI | 77165924 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACA AGCAGGTTGA TGGCGAATTG GTACGGCGCG TGCAGCGCGG AGATAAAAAA
GCATTTGACA TGCTGGTTCT CAAGTATCAA CGGAAAATTT TAAGGCTTAT TTCCCGTTAT
ATCCACGATC CTGGGGAAGC CTTAGATGTA GCCCAAGAAG CTTTCATTAA AGCTTACCGG
GCTTTACCCC GCTTCCGGGG GGAAAGTGCG TTTTATACCT GGTTATATCG CATTGCCATC
AATACCTCCA AGAATTATCT CGTAGCTCAA AGCCGCCGTC CCCCTGAGAA TGACATTGAT
GCAAAAGATG CGGAACAGTA TGCAGCAGAA ACGGTACTAA AGGAGTATGC CACACCCGAA
AATTTGCTGC TACGTGATGA AATCGAGAAG ACAATCAACG AGACCATCGA GGGATTACCG
GATGAGTTAC GTGTGGCGAT TATTTTGCGC GAATTCGAAG CTATGAGCTA CGCGGAAATT
GCTGAAGCGA TGGATTGTCC TATTGGGACC GTGCGCTCGC GCATTTTCCG AGCGCGAGAA
GCTATCGACG AAAAGGTTAA ACCTCTTTTA GCTTATTAA
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| Protein sequence | MSDKQVDGEL VRRVQRGDKK AFDMLVLKYQ RKILRLISRY IHDPGEALDV AQEAFIKAYR
ALPRFRGESA FYTWLYRIAI NTSKNYLVAQ SRRPPENDID AKDAEQYAAE TVLKEYATPE
NLLLRDEIEK TINETIEGLP DELRVAIILR EFEAMSYAEI AEAMDCPIGT VRSRIFRARE
AIDEKVKPLL AY
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