Gene Noc_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2464 
Symbol 
ID3704866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2810464 
End bp2811516 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content48% 
IMG OID637738943 
ProductMucB/RseB 
Protein accessionYP_344447 
Protein GI77165922 
COG category[T] Signal transduction mechanisms 
COG ID[COG3026] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTC CCGCTAAGCA CTTCCAGAGA TTTTTCTGCA CTCTCCTCTT AACGATTTTG 
GCCACATCGC TTCCATCCGC TTCCCTAGGG AAAAGCTCCG ATACTGCGTT ACAACTCATT
GATAGAATGG GGAAGGCGGC AGAATCCCTT AATTACCAGG GTGTTTTCGT TTATTTGCAG
AATAGCCGAC TCAAAGCAGT CCAGGTGATT CATAAAGTAG ACGAGTATGG GGAGCACGAG
CGCCTGGTTT CTTTAAATGG TATGCCTCGG GAGATTATCC GCAATAATGA GCTAGTTACT
TGTATCCTCC CTGAGGATAA GGCTGTATTG GTGGATGAAC ACCGCTACCC GGATAAAGCA
GTCGTTGCCA GGAGCAAGAG TTTTCGCAGC AATAATGGTC TTTCCAGGCG ATTACCTGCT
AAGCTGAAGG CCATGCGGGA GCATTACCAG TTCTCCCTCG GAAAGCCGGA TCGAATCGCG
GGAAGAGAAA CGCAACAGGT TGTCATTGTT CCCAGAGATC AGTATCGCTA TGGCTATCAC
TTATGGATAG ATAGGGAGAC GGGGCTATTA CTGAAGACTG TTATGACTGA AGATGGGGGG
CAGATTCTCG AGCAGATGAT GTTTACTTCG CTTTTGCTGC CTGCGAAAAT TCCTGATACC
GAACTGGTGC CGACGGTAGC GGGAAGGGAG TTTTCATGGC GGGAAGGTGA ATCTCTGAGT
ATGGACCCGG ATAATCATGA AAGTAAGTGG AAGATCGGCT GGCTTCCTGC GGGGTTTGCT
CTCGTGGCCC ACAGCAGAGA CTTATTGCCC AATAGCCAAG CGCCCGTAGA ACATATGGTT
TATTCGGATG GGTTAAGTTC GGTGTCCATA TTTATTGAGC CTGTAAGGCA TACTAAGCGG
AGCCATTTAA GTGGATTTTC AAGCATGGGA GCAGTCAATG CCTATGGTAC TATTCAAGCA
CTCCATTACC TAACGCTGGT GGGGGAGGTT CCTCATATAA CCGTGGAGCG GATGGGTAAA
TCTATTCGTT ATCTAAGTTC CAATACCGAT TAA
 
Protein sequence
MKAPAKHFQR FFCTLLLTIL ATSLPSASLG KSSDTALQLI DRMGKAAESL NYQGVFVYLQ 
NSRLKAVQVI HKVDEYGEHE RLVSLNGMPR EIIRNNELVT CILPEDKAVL VDEHRYPDKA
VVARSKSFRS NNGLSRRLPA KLKAMREHYQ FSLGKPDRIA GRETQQVVIV PRDQYRYGYH
LWIDRETGLL LKTVMTEDGG QILEQMMFTS LLLPAKIPDT ELVPTVAGRE FSWREGESLS
MDPDNHESKW KIGWLPAGFA LVAHSRDLLP NSQAPVEHMV YSDGLSSVSI FIEPVRHTKR
SHLSGFSSMG AVNAYGTIQA LHYLTLVGEV PHITVERMGK SIRYLSSNTD