| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2462 |
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| Symbol | |
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| ID | 3704864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2808437 |
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| End bp | 2809852 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738941 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_344445 |
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| Protein GI | 77165920 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTT TTTTGAACAA ACAATGGGCC CTCTTGGCGA TATCGCTACT GATTGCCGTG
ACTGGGCAGG CCGCAGGGTT GCCTGATTTT ACTGAATTGG TGAAAAATAA TAGTCCTGCG
GTGGTTAATA TCAGCACTAC CCAGAAAATC ACTCAAGGCG GCTCCCGTTT GCCACACGGG
TTACACCAAT TACCAGAGGG TAGTCCCTTT GAGGATTTTT TTCGCCGCTT TTTTGACGAG
GGAACGGGTG AACCCCGGAG CTTTGAAACC CATTCTTTAG GATCAGGTTT TGTTATTTCA
TCGGATGGGT ACATTATCAC GAATAATCAC GTCATCCAGG ATGCAGATGA GATTATCGTG
CGCTTTAGCG ACCGAAGAGA GCTGGAAGCC GAAGTTGTAG GGAGTGACGA GAGTAGCGAT
CTTGCCCTGC TAAAAGTAGA AGCAAAAGAT CTACCTACTC TGAGGCAAAG CAATGCCAGT
CAGCTTAAGG TTGGCGAATG GGTGCTTGCC ATAGGTTCGC CCTTTGGTTT CGAGCATTCG
GCCACAGCGG GCATTGTTAG TGCTTTAGGA AGGAGTTTGC CGGAGGAGAG CTATGTTCCG
TTTATTCAAA CTGATGTGGC TATTAACCCA GGAAATTCAG GCGGCCCTCT CTTTAACTTA
ATGGGGGAAG TAGTGGGTAT CAACTCTCAG ATCTACAGCC GTACAGGCGG TTTCATGGGG
CTTTCTTTTG CTATACCTAT TGATGTAGCC ATGGAGGTCG TGGATCAACT CAAGGAAAAA
GGACGGGTGA CTCGAGGATG GCTGGGGGTT GTGATTCAGG ATGTTACCCG TGAGTTGGCA
GAATCATTTG GGCTTGGGAA ACCTCAAGGG GCTCTGGTAG CCAGGGTCTT AGCGGATAGC
CCAGCCGCTA AGGGAGGAGT CCAAGTGGGC GATATTATCC TGGATTTTAA TGGAAAATCA
GTGCCTCGGT CAGCGGCCTT GCCGCCACTG GTGGGGCGAG CCGAGATTGG TGAGACGGTT
GACATCCAAA TTTTACGTGC TGGTGATGAA AAAACACTCA AAATTAAAAT TGGAGAGCTG
CCAGAAAAAA AGGAATTGGA GAAGGCAACA GGGAAACCGG ATCATATATT TGAGGAGCGA
CTTGCGCTTG AGATAGCCGA CTTGAAAAAA GAGGAGCGTA CACAGCTTGA TGTGGTCTCT
GGTGTGCGAG TGACGAAAGT AGAAGAAGGG CCCGCCTTCG AGGCGGGAAT TCGGCATGGG
GATATTATTC TTAGTATTAA CAATACGGAG ATAAAGGATA CTGCCCAGTT CAAAGAGCTT
GCTAAAAAAT TGCCTGCGGG TAAGGCAGTG CCTCTTTTAT TACAACGAGA GCAGACCACC
TCTTTTATCG CCATCACCAT TCCAGAGGGG AGCTGA
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| Protein sequence | MKRFLNKQWA LLAISLLIAV TGQAAGLPDF TELVKNNSPA VVNISTTQKI TQGGSRLPHG
LHQLPEGSPF EDFFRRFFDE GTGEPRSFET HSLGSGFVIS SDGYIITNNH VIQDADEIIV
RFSDRRELEA EVVGSDESSD LALLKVEAKD LPTLRQSNAS QLKVGEWVLA IGSPFGFEHS
ATAGIVSALG RSLPEESYVP FIQTDVAINP GNSGGPLFNL MGEVVGINSQ IYSRTGGFMG
LSFAIPIDVA MEVVDQLKEK GRVTRGWLGV VIQDVTRELA ESFGLGKPQG ALVARVLADS
PAAKGGVQVG DIILDFNGKS VPRSAALPPL VGRAEIGETV DIQILRAGDE KTLKIKIGEL
PEKKELEKAT GKPDHIFEER LALEIADLKK EERTQLDVVS GVRVTKVEEG PAFEAGIRHG
DIILSINNTE IKDTAQFKEL AKKLPAGKAV PLLLQREQTT SFIAITIPEG S
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