Gene Noc_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2448 
Symbol 
ID3704850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2793677 
End bp2794558 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID637738928 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_344432 
Protein GI77165907 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGA AAGTCGCCAT CGTTCAACAA GTCTGTAGCC AGCAGCGTCA AGCAAATATC 
GGCCATAGCA TCCGAGGGAT TCGAGAGGCG GCGGCACAAG GCGCAAAGCT GATTCTATTG
CCAGAACTCC ATACCGGACC TTACTTTTGC CAGACCGAGA ATACCCGGTA TTTTGATCTG
GCAGAGCCTA TCCCTGGCCC TTCAACGGAA GTTTTTGGCG CTCTGGCTGC AGAGCTTGGG
GTGGTCCTTG TCATTTCCCT ATTCGAGCGC CGGGCACCGG GCATTTACCA TAACACAGCG
GTGGTTTTGG AGGCCGATGG CCGCATGGCG GGGCGTTATC GCAAGATGCA CATTCCTGAT
GACCCCGGCT TTTATGAAAA ATTTTATTTT ACCCCTGGCG ATCTAGGATT TACCCCCATT
GACACTTCCG TTGGACGCCT TGGAGTCTTG GTTTGCTGGG ATCAATGGTA TCCCGAGGCG
GCCCGGCTAA TGGCCTTAGC TGGGGCGGAA TTACTGCTTT ACCCCAGTGC TATTGGCTGG
GACTCGCACG ATGATGAAGC AGAAAAATCC CGCCAGCAGG AAGCCTGGAT CACGATACAA
CGGGGCCATG CCATTGCTAA TAGCTTGCCT CTTCTCGCCA GCAACCGAAT TGGCCTGGAG
CCTGACCCCA GCCAACAGAC GCCAGGCATC CAGTTTTGGG GCAGCAGTTT TATCGCCGGA
CCTCAAGGCG AGTTGCTCGC CGTGGGACCA AGGGATGAGG CGGTAGTATT AGTGGCAGAA
ATCGACTTCC AACGCACCGA AACCCTGCGC CGAATTTGGC CCTACCTGCG GGATCGCCGG
ATTGACGCCT ATGAACCCCT TACCAAACGT TATCTTGAGT AA
 
Protein sequence
MPLKVAIVQQ VCSQQRQANI GHSIRGIREA AAQGAKLILL PELHTGPYFC QTENTRYFDL 
AEPIPGPSTE VFGALAAELG VVLVISLFER RAPGIYHNTA VVLEADGRMA GRYRKMHIPD
DPGFYEKFYF TPGDLGFTPI DTSVGRLGVL VCWDQWYPEA ARLMALAGAE LLLYPSAIGW
DSHDDEAEKS RQQEAWITIQ RGHAIANSLP LLASNRIGLE PDPSQQTPGI QFWGSSFIAG
PQGELLAVGP RDEAVVLVAE IDFQRTETLR RIWPYLRDRR IDAYEPLTKR YLE