Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2445 |
Symbol | |
ID | 3704602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2790115 |
End bp | 2790741 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637738925 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_344429 |
Protein GI | 77165904 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAG GAGTTCCTCA AGCAACTGTA TTTGTTGATG ATGATGATGA GGGGGTGCGA GATTCTCTGC GCTGGGTTAT CGAATCAGCA GGGTTTAAGG TCAAAGTTTA TGCTTCGGCA GGGGAGTTTT TGGAGAAATG GGAGCCCAGC CAGCCAGGTT GCCTGGTGCT TGATGTCAGG ATGCCTGAAA TAAGCGGATT ACAGCTGCAG AAATTACTTT CTAAAAAAAA TAACCTATTG CCCATTATTT TTATTTCCGC CCATGGGAGT GTACCGGATG CGGTGAGTGC ATTGCATGAT GGGGCGGTCG ATTTTCTTGT GAAACCTTTC GATAATCAGA TCCTGATAGA GCGAATTCAA AGCAGCCTTG ATATGGATAG AAGGAAGCGT GAAAGGAGGC AACAGCGAGA GAAGATTGCT CATCGGATGA CCCAGTTGAC CGCTCGCGAG CGCCAGGTAA TGGATCTTAT CGTGATGGGG AAAGCGAATA AAGTGGTGGC CATGGAGCTG GGAATCAGTA CTAAAACCGT TGAGATCCAT CGCTCCCGGG TGATGGAGAA ACTGGCGGCC AGAAATCTGG TGGAGCTGAT CCATCTAACT CGTTTTTTGC AGAATGGAGA CGACTAA
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Protein sequence | MEKGVPQATV FVDDDDEGVR DSLRWVIESA GFKVKVYASA GEFLEKWEPS QPGCLVLDVR MPEISGLQLQ KLLSKKNNLL PIIFISAHGS VPDAVSALHD GAVDFLVKPF DNQILIERIQ SSLDMDRRKR ERRQQREKIA HRMTQLTARE RQVMDLIVMG KANKVVAMEL GISTKTVEIH RSRVMEKLAA RNLVELIHLT RFLQNGDD
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