Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2442 |
Symbol | |
ID | 3704599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 2787565 |
End bp | 2788284 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637738922 |
Product | ribonuclease PH |
Protein accession | YP_344426 |
Protein GI | 77165901 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.987543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCAA GCGGCCGCGC TCCACACGAA TTACGTCCTA TCCACTTTAC CCGCCACTAC ACTCGCTATG CCGAAGGTTC AGTATTGGTG GAATTTGGCA ATACCCGAGT CATCTGTAAC GCTTCGGTCG AAGATCGGAT TCCCCGATTT CTAAAAGGCA CGGGGCGAGG CTGGATTACC GCTGAATATG GAATGCTACC CCGCTCCACC CATAACCGGA TGGGGCGGGA AGCGGCCCAA GGGCGCCAAG GAGGGCGTAC CCTAGAAATC CAGCGCTTTA TTGGGCGCGC TTTGCGGGCA GTGGTGGATC TGGCTGCCCT GGGCGAGGTC ACTGTTACCC TCGACTGCGA TGTCATTCAG GCAGATGGCG GCACCCGGAC CGCCGCCATC ACAGGCAGCT ATGTAGCTCT GGTAGATGCG ATCAACAACC GCCTTAAAAA AAGGATCATT ACCCATAGCC CTATTCATGG CCAGCTCGCA TCGATATCAG TAGGTATTTA CGAAGGAACA CCCGTGCTAG ATCTGGATTA CCGGGAAGAT TCCACCGCAG AAACCGACAT GAATGTGGTC ATGAATGAAG CAGGAGCATT TATTGAAATA CAGGGAACCG CTGAAGGCCA TGCTTTTCGG ATGAATGAAT TACAAGCCAT GCTGGATTTA GCGAAAAGCG GTATTAATAC TTTGCTTGCT CAACAGACGG AAGTCTTGGC CAAGAATTAA
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Protein sequence | MRPSGRAPHE LRPIHFTRHY TRYAEGSVLV EFGNTRVICN ASVEDRIPRF LKGTGRGWIT AEYGMLPRST HNRMGREAAQ GRQGGRTLEI QRFIGRALRA VVDLAALGEV TVTLDCDVIQ ADGGTRTAAI TGSYVALVDA INNRLKKRII THSPIHGQLA SISVGIYEGT PVLDLDYRED STAETDMNVV MNEAGAFIEI QGTAEGHAFR MNELQAMLDL AKSGINTLLA QQTEVLAKN
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