Gene Noc_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2428 
Symbol 
ID3704997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp2775348 
End bp2775929 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID637738909 
Productsuperoxide dismutase 
Protein accessionYP_344414 
Protein GI77165889 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.785927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATC GTTTACCAGA ACTCCCTTAC GCCCTGAACG CCCTAGAGCC CCATATTTCC 
CAGGAGACGC TCGAATACCA TTATGGCAAG CATCACCAAA CCTATGTGGA TAAACTCAAT 
GGACTTGTCC CTGGAACGGA ATTTGAGAAC GCCTCCCTAG AAGAAATCAT TACCAAGGCT 
TCCGGTACGC TCTTCAATAA TGGCGCGCAA GTATGGAATC ACACCTTTTA TTGGAATTGC 
CTAACGCCCC AGGGAGGCGG TGAACCCAGC GGCGCCTTAT TAGAGGCTAT AGAAAAAAAT 
TTTGGTTCGT TTAGCGATTT TAAAGAAAAA TTTAGCCAAT CGGCCACCAC TCTGTTTGGT 
TCGGGCTGGG CCTGGCTAGT CAAAAATTCC GATGGTTCCT TAGACATTGT AGGTACCAGC 
AACGCAGGTA ACCCCCTGAC CGAAGGTAAA ACTCCTTTAC TCACCTGCGA TGTCTGGGAG 
CATGCATACT ATATTGATTA CCGTAACGCT CGGCCCAAAT ACCTGGAAGC CTTCTGGAAG 
CTGGCTAACT GGGATTTTGT TGCCAAGAAT CTGGCGAACT AA
 
Protein sequence
MTHRLPELPY ALNALEPHIS QETLEYHYGK HHQTYVDKLN GLVPGTEFEN ASLEEIITKA 
SGTLFNNGAQ VWNHTFYWNC LTPQGGGEPS GALLEAIEKN FGSFSDFKEK FSQSATTLFG 
SGWAWLVKNS DGSLDIVGTS NAGNPLTEGK TPLLTCDVWE HAYYIDYRNA RPKYLEAFWK 
LANWDFVAKN LAN