| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2425 |
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| Symbol | |
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| ID | 3704994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2771796 |
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| End bp | 2774060 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738906 |
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| Product | ATP-dependent Clp protease |
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| Protein accession | YP_344411 |
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| Protein GI | 77165886 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.520524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCA GGGACCTAGA AACAAGCCTG AACCATGCCT TTAAAGATGC ACGGGAGAGA
ATGCATGAAT TTCTCACTGT AGAGCACCTC TTGTTTGCCA TGCTGGATAA TCCGGCAGCA
GCTGCTGTAT TACGCGCCTG TGGTGCCAAT CTGGAGCAAT TAAAACAAGA AATCACGGTT
TTTCTAAATG AAACCACACC CCTATTATCG ACCGAGGATG GGCGGGACAC TCAGCCAACC
CTTGGTTTTC AAAGGGTGTT GCAACGGGCG GTACTCCAGG TTCAGTCATC GGGGCAAAAG
GAAGTTACCG GCGCTAATGT TTTGGTTGCT ATTTATGGGG AGCAGCAGTC CCAAGCCGTT
TATTTTCTAA AGCGCCAGCA TATGACTCGT TTGGATATCG TCAATTACAT TTCCCATGGT
ATCAGTAAGG TTGATCCCCA AGGCAGCGGT GGGGATTCGG CTGGCGCTCC GGAAGAGGCG
GAGACCGCCG GTGCTGAAAC CTCTGGGCAA AACCCGCTAG AGACTTATGC CACCAATCTT
AACCGGCTAG CGGCGCAGGG AAGAATTGAC CCTTTGATTG GGCGCAGCCT GGAATTGGAG
CGGACAATCC AGATTTTGTG TCGCCGGCGT AAGAACAATC CTTTGTTTGT CGGTGAGGCT
GGAGTAGGTA AAACAGCCTT GGCCGAGGGG CTGGCCTGGA AAATCTCCGA AGGGGATATT
CCCGATATTT TACGGGACTG CACCATTTAC AGCCTGGATA TGGGGACGTT ATTGGCTGGC
ACTAAGTATC GGGGGGATTT TGAAAAGCGT TTAAAAGGAA TTTTGTCCCA GCTGAAAAAA
GAAAAATCCG CTATCCTCTT TATCGACGAG ATTCATACTG TGATTGGGGC GGGTTCGGCT
TCTGGCGGGG TGATGGATGC TTCTAATCTT ATTAAGCCCG CGTTGGCTTC TGGTGAATTA
AAATGTATTG GCTCCACCAC CTATCAAGAA TACCGGAATA TTTTTGAGAA GGATCGGGCT
TTAGCACGCC GATTTCAGAA AATTGATATC CCCGAGCCTT CGGTAGAGGA AACAGTACAG
ATTTTGCGTG GACTGAAACC ACGCTTGGAA GCACATCATA AACTCCGTTT TTCCCAGGCT
GCATTGCGGA CGGCTGCTGA ACTTTCAGCC CGTTATATTA ATGATCGCCA CCTTCCGGAC
AAGGCCATTG ATGTGCTTGA TGAATGTGGC GCCAGCCAGC AGTTACTTAC ACCTTCCAGG
CGCAAAAAGG TCATTGGAGT GCAGGATGTG CAAACGGTAG TCGCTAAGAT GGCCCGTATT
CCGCCTAAGC ACGTCTCCGC TTCCGATAAG GAAAGTCTGG CTAAGCTGGA AGCTAATCTC
AAGCGCGTTA TTTTTGGGCA GGATAAAGCT ATTGAGGCGC TGGGTGCAGC CATCAAAATG
TCCCGCTCGG GGTTAGGAGA TACTGACCGG CCGGTGGGAT CTTTCTTGTT TTCCGGTCCA
ACCGGTGTTG GCAAGACGGA AGTGACTCGC CAATTGGCCC ATATTCTGGG TATTGAGCTC
ATCCGTTTTG ATATGTCTGA ATATATGGAG CGTCATACGG TATCCCGCCT TATCGGGGCG
CCGCCGGGCT ATGTAGGCTA CGATCAAGGA GGGTTGCTGA CGGAGGCTAT TTGCAAGAAT
CCTCATGCGG TTTTGCTGCT TGATGAAATC GAAAAGGCGC ATCCAGATGT GTTTAATTTG
CTGCTGCAAG TGATGGACCA TGGCACGCTG ACGGATAATA ACGGGCGCAA GGCGGACTTT
CGTAATGTTA TTCTGATCAT GACTTCCAAC GCCGGGGCGC AGGAGATTAG CCGGACTTCC
ATAGGCTTTA CGCTGCAAGA CCATTCTAGT GATGCCATGG AAGTGATCCG GCGGACATTT
AGCCCTGAGT TTCGCAACCG ATTGGATGAC ATTATCCAGT TTCAGTCCCT GGATGCGCCC
GCCATTAGCA GAGTTGTAGA TAAGTTTATA TTTGAATTGG AGTTTCTCCT GCAAGATAAA
AATGTGACCC TTGAGGTAAG CGAAACGGCT CGGGCTTGGC TTGCCAAACA TGGCTATGAT
GAGAAAATGG GCGCCCGCCC TATGGCGCGC CTCATACAGG AAAGAATTAA AAGACCTCTA
GCGGAAGAGT TATTATTTGG TAAGTTGGCC AAGGAGGGGC ATGTGGCGGT CGAGGTAGTT
GGAGGCGAGC TTAGGCTAGC TTGCCAAAGT GGCAGCAGCA GTTAG
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| Protein sequence | MLSRDLETSL NHAFKDARER MHEFLTVEHL LFAMLDNPAA AAVLRACGAN LEQLKQEITV
FLNETTPLLS TEDGRDTQPT LGFQRVLQRA VLQVQSSGQK EVTGANVLVA IYGEQQSQAV
YFLKRQHMTR LDIVNYISHG ISKVDPQGSG GDSAGAPEEA ETAGAETSGQ NPLETYATNL
NRLAAQGRID PLIGRSLELE RTIQILCRRR KNNPLFVGEA GVGKTALAEG LAWKISEGDI
PDILRDCTIY SLDMGTLLAG TKYRGDFEKR LKGILSQLKK EKSAILFIDE IHTVIGAGSA
SGGVMDASNL IKPALASGEL KCIGSTTYQE YRNIFEKDRA LARRFQKIDI PEPSVEETVQ
ILRGLKPRLE AHHKLRFSQA ALRTAAELSA RYINDRHLPD KAIDVLDECG ASQQLLTPSR
RKKVIGVQDV QTVVAKMARI PPKHVSASDK ESLAKLEANL KRVIFGQDKA IEALGAAIKM
SRSGLGDTDR PVGSFLFSGP TGVGKTEVTR QLAHILGIEL IRFDMSEYME RHTVSRLIGA
PPGYVGYDQG GLLTEAICKN PHAVLLLDEI EKAHPDVFNL LLQVMDHGTL TDNNGRKADF
RNVILIMTSN AGAQEISRTS IGFTLQDHSS DAMEVIRRTF SPEFRNRLDD IIQFQSLDAP
AISRVVDKFI FELEFLLQDK NVTLEVSETA RAWLAKHGYD EKMGARPMAR LIQERIKRPL
AEELLFGKLA KEGHVAVEVV GGELRLACQS GSSS
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