Gene Noc_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2422 
Symbol 
ID3704991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2769525 
End bp2770256 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID637738903 
ProductABC transporter, ATPase subunit 
Protein accessionYP_344408 
Protein GI77165883 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAGG AGCTAGTCGT CTCGATTAAA GATGTTTGCT TTTCTTATTC TGGCCCTAGG 
GTGCTGGAGC GTATTAACCT TGAGGTGTAT CGGGGCGAGT TCTTAGGGCT GGTGGGTCCT
AATGGAGGGG GGAAGAGTAC CCTGCTTAAA ATAATTCTAG GATTGTTGAG ACCCCTATCC
GGCCACGTTT CCGTGCTAGG CTTGCCGCCT GAGCAGGGAC GGGCGGCAAT GGGTTACGTG
CCCCAGCATA CCGCTTTTCC TGAAGATTTT CCGATTTCAG TAGAGGCAGC TGTCCTCCAG
GGGCGATTAG GTAAAACCCG GGTTATTGGT GGCTATACGC GAGAGGATCG AGCCTTTGCC
CGGCGCGCCA TGGAGCAGGT GGAAATTCTG GAGTTTAGCA CCCGCCCTTT AGCCGCCCTC
TCTGGGGGGC AGCGCCAGCG GGTATTGATT GCACGGGCTT TGGCTATGGA ACCTGAAATT
TTGATCCTGG ATGAGCCGAC CGCCCATGTG GATCTGCGCC TAGAAGAGAA TTTCTTTCAC
TTGCTTAGGC AACTTAATCA GCAGATGACT ATTGTCGTTG TTTCTCATGA TATCGGTTTT
ATTTCCCATT ATGTCAATCG GGTTGCTTGC CTCAACCAGA CTTTAATCTG CCATGAGACA
GCGGCCGTCA GCGGAGAAAT CATCAAGCAG CTCTATGGCG CCAGTGTGCG CATGATTGAC
CATACTCATT AA
 
Protein sequence
MKQELVVSIK DVCFSYSGPR VLERINLEVY RGEFLGLVGP NGGGKSTLLK IILGLLRPLS 
GHVSVLGLPP EQGRAAMGYV PQHTAFPEDF PISVEAAVLQ GRLGKTRVIG GYTREDRAFA
RRAMEQVEIL EFSTRPLAAL SGGQRQRVLI ARALAMEPEI LILDEPTAHV DLRLEENFFH
LLRQLNQQMT IVVVSHDIGF ISHYVNRVAC LNQTLICHET AAVSGEIIKQ LYGASVRMID
HTH