Gene Noc_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2421 
Symbol 
ID3704990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2768689 
End bp2769519 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content49% 
IMG OID637738902 
ProductABC Mn2+/Zn2+ transporter,inner membrane subunit 
Protein accessionYP_344407 
Protein GI77165882 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT GGGAGGCATT TGGTCATGTC GCTTTTCTTC AAAATGCCCT GATAGCTGGA 
ATTCTAGCGG GTTTGGGGTG TGGTGTTGTT GGCAGCTTTG TAGTAGTTAA GCGGATTGGC
TTTCTGGCGG GAGGCATCGC CCATACGGTT TTGGGAGGTA TGGGGGTAGC CTATTATCTA
GGTAAAAGCC CCTTGTCAGG GGCTTTAGTG GCTGCTTTGC TGGCAGCATT GCTTATTGGC
TGGGTAAGTT TGCAATGGCG GGAACGGGAA GATACCTTAA TTAGTGCGTT CTGGTCCATG
GGGATGGCGG TAGGGATGAT TTTTATCTCT CGCACGCCAG GTTACAACGT TGATCTGATG
GGCTATCTGT TTGGCAATAT CCTGATGGTA TCGCAGGCGC AACTTTACTT GATGGCCGCC
GTGGATGGAG TGATTATCCT TACTGTGATG TTGTTCTATA AGCAATTTCT TGCCCTTAGC
TTTGATGAGG AATTTGCCCG CCTCAGGGGA GTTCCGGTTA CTTTTTTCTA TTTGCTACTC
CTCTGCATGG TAGCGCTCAC GGTAGTTCTT TTAATTCAAG TAGTCGGTTT AATTCTAGTT
ATTGCTTTGT TAATGTTGCC TGCGGCCATT GCTGGTCAAT ATATGGGGTC TCTGGTCGGT
ATGATGCTGC TAGCCTCTCT CTTAGGGATG CTATTTACTA GCGCTGGCTT AGCCATTTCT
TATGAGCCGG ATTTACCAGC GGGCTCCACG ATTGTGTTGG TGACGGGAGG CGCTTATTTA
TTTTCTACTG TAGGCACGGG ATTGCGGCAA CGCTGGCGGG CACAGCGCTA A
 
Protein sequence
MDFWEAFGHV AFLQNALIAG ILAGLGCGVV GSFVVVKRIG FLAGGIAHTV LGGMGVAYYL 
GKSPLSGALV AALLAALLIG WVSLQWRERE DTLISAFWSM GMAVGMIFIS RTPGYNVDLM
GYLFGNILMV SQAQLYLMAA VDGVIILTVM LFYKQFLALS FDEEFARLRG VPVTFFYLLL
LCMVALTVVL LIQVVGLILV IALLMLPAAI AGQYMGSLVG MMLLASLLGM LFTSAGLAIS
YEPDLPAGST IVLVTGGAYL FSTVGTGLRQ RWRAQR