Gene Noc_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2420 
SymbolnudE 
ID3704989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2767954 
End bp2768508 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content52% 
IMG OID637738901 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_344406 
Protein GI77165881 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGATA AAGAACCCAT CAAGCCGCAA ATTATTGCCA CGGAAACGGT CGCTAGGACG 
CAGTTGTTTC GGGTGGAGAC CGTCGATCTG TGTTTTTCCA ACGGTGTTGA AACTCGCTAT
GAGCGCCTTA GAAGTGGAAG ACATGGCGCG GTTTTAATTG TGCCCTTGCT AGACCGAGAG
ACCGTGTTGC TTATTCGGGA ATATGCGGTC GGTACCGAGC GATATGAATT AGCCTTGCCC
AAGGGACGGG TTGAGACAGG AGAAACACTA TTCGCAGCGG CTAATCGGGA GTTAATGGAA
GAAGTGGGGT ATGGGGCTAG CCGTCTTGCT TATCTTACTG CCTTGACGGT AGCGCCCGGT
TATATGGAAC ATACCACTCA TATAATCATG GCGGAGGAAC TCTACGAAGA ACGCCGCCCA
GGGGATGAAC CCGAGGAGAT CGGGGTGGTG CCATGGCGTT TAGCGGAATT ACCAGCGTTA
CTAGCCCGGG AGGATTGTAC CGAGGCCCGC AGCATTGCCG CTTTGTTTAT GGTAAAAGAA
AAATTGAGTC TATGA
 
Protein sequence
MADKEPIKPQ IIATETVART QLFRVETVDL CFSNGVETRY ERLRSGRHGA VLIVPLLDRE 
TVLLIREYAV GTERYELALP KGRVETGETL FAAANRELME EVGYGASRLA YLTALTVAPG
YMEHTTHIIM AEELYEERRP GDEPEEIGVV PWRLAELPAL LAREDCTEAR SIAALFMVKE
KLSL