| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2380 |
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| Symbol | |
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| ID | 3704820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2726257 |
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| End bp | 2728485 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738863 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_344368 |
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| Protein GI | 77165843 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGC ATATAACACC ATCCGAAAAG AAAAGTAGTC AGCGAGCCAA ATATATGGCT
GCTTTACTCC GATATTTGCT CAAAAAATTT TACCGAGTCC AAATCAACGG CTTAGAGCAT
TATCAAGAGG CTGGCCCCCG AGTATTATTA GCCGCCAACC ATGTCTCCTT TCTCGATCCA
TTGCTCCTGG CAATGTTTCT CCCCCAGGAC TCGGTCTTTG CCGTCCCCCC TCAGCTTGCC
CGCAGTCGCT GGCTACGCCC CTGGCTCAAA CTGCTACCTA CTTTTCCTTT AGATCTCGCT
GATCCCACGG CTCCAAAAGA GTTACTCAAA CGCCTCAAAA AACACCATAA GGTCATTCTT
TTTCCTGAAG GACGGATGAG CATGACGGGT TCGATGATGA AAATTTACCC CGGTCTAGGG
TGGGCTGCCT GTAAAGCCGG AGCAACGGTA CTGCCAATAC GGATCGAAGG TGCTGAAGAC
ACACCCTTTT CCCGCATGCC CGGCCGCCGC AAGTGGTTCC CTTCCATTAC TATTACTCTG
CTGCCACCCC AGGACTTTAC CTTACCACCC CAACTTTCCA GCCGGGAACG GCGCAAGCAG
GCAGAAGCCC GGCTATTTGA GGCCATGGCA AAGATAAAGC TCTCAAATGG TCATTACCGC
CAGACTATTT TTGATGCCTT GCTGGCGGCC CGCCAAGTCC ATGGCGGAAA ATTTCGAATT
GCACAGGACC TAGAGCGCCA GCCGATACGC TACAATCAGC TAATACGACG GGCTTTTCTG
TTAGGCGCCG TGCTTACGCG GGACACCCAG CCAGGCGAAT ATGTCGGCAT ACTGCTGCCT
AATACTTTAA ACACCGCGAT ACTCTTTTTT GCCTTGCACA GCCAAGGGCG AATACCTGCC
ATGTTGAACT TCACCAGTGG CGTTAGCGGC CTTTCGGCGG CCCTTGAGGC AAGTGGTATC
CGGACTGTCT ATACTTCACG GCGCTTTATC GAAGCTGCTG AATTACAGTC TATAGAAAAA
GCCCTAACTT CTAAGGTTCA GTTAATTTAC TTAGAAGACT TACGTCAGCA CATCGGCCCT
TGGAAATTTC TGCAAGCTAC CGTGCGCGCC CATTTCGCCC GTGCTACCTA CCACCGCACA
GTGCCCCAAA CGGCCCCCGA TGATCCGGCC GTGATTTTAT TTACCTCGGG CTCTGAAGGA
ATGCCCAAGG GTGTGGTGCT TTCCCACATC AACCTTCTGG CCAATATTCA ACAAATCGCA
AGTCGGATCG ATTTTACGAG AGAAGACCTG GTTTTTAATG CCCTGCCTGT CTTCCACGCC
TTTGGGTTAA CGGCGGGAAC CCTCTTGCCT CTCCTTGGCG GCACCCGTTT ATTTTTATAT
CCCTCGCCAC TTCACTACCG AGCGATTCCC GAAGCCGCCT ACCAGACCGA CGCTACTATC
TTATTTGGCA CCAATACCTT CCTCGCCGGC TATGGCCAAC ATGCCCATCC TTACGACTTT
TATAGCATAC GCTACGTATT TGCAGGAGCG GAAAAATTGC AGGAACCCAC GCGCCGGCTA
TGGGCCGAGA AATTCGGGGT ACGCATTTTT GAAGGCTACG GCGTTACGGA GACCAGCCCA
GTATTAGCTG TTAATACTCC CGTTGATCAC CGCTCAGGCA CGGTGGGGAA ACTAGTGCCT
GGAATTCAAT ACCATATTGA GCCAGTAGCG GGCATTCACC AGGGAGGGCG CTTGGAAGTG
TATGGCCCCA ATGTCATGCT CGGCTATTTA TTACATCAGG CCCCAGGGCA GTTACAACCG
CCCCAAACTC CCCGTGGCAA AGGCTGGTAC GATACCGGGG ATATTGTCAG TATCGACGAA
GAGGGTTATT TGACCATCCG TGGGCGCGCT AAGCGTTTTG CCAAAATTGC GGGTGAGATG
GTTTCCCTTA CCACGGTAGA AATGCTGGCC GCCACCGTCT GGCCAGACGT ATGCCATGCT
GCCATTTCCC TACCAGACGC TAAAAAGGGA GAAATGCTGA TACTGTTAAC CGAGCAAAGA
GGAGCTGAAC GCCGCCCTCT ACTGCTCCAG GCAAAGGCAG AGGGACTCAG CGAACTCAAC
GTGCCGCGCC GGATTTTAGT GGTAGAAAAA ATTCCCCTCC TGGCCAGCGG CAAAGTCGAT
TACACCAGTG CTCAACGACA AGCAGAGCAG CAACTACCGC AGTTAGAAGA AACGCAGCTA
AACAGCTGA
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| Protein sequence | MEQHITPSEK KSSQRAKYMA ALLRYLLKKF YRVQINGLEH YQEAGPRVLL AANHVSFLDP
LLLAMFLPQD SVFAVPPQLA RSRWLRPWLK LLPTFPLDLA DPTAPKELLK RLKKHHKVIL
FPEGRMSMTG SMMKIYPGLG WAACKAGATV LPIRIEGAED TPFSRMPGRR KWFPSITITL
LPPQDFTLPP QLSSRERRKQ AEARLFEAMA KIKLSNGHYR QTIFDALLAA RQVHGGKFRI
AQDLERQPIR YNQLIRRAFL LGAVLTRDTQ PGEYVGILLP NTLNTAILFF ALHSQGRIPA
MLNFTSGVSG LSAALEASGI RTVYTSRRFI EAAELQSIEK ALTSKVQLIY LEDLRQHIGP
WKFLQATVRA HFARATYHRT VPQTAPDDPA VILFTSGSEG MPKGVVLSHI NLLANIQQIA
SRIDFTREDL VFNALPVFHA FGLTAGTLLP LLGGTRLFLY PSPLHYRAIP EAAYQTDATI
LFGTNTFLAG YGQHAHPYDF YSIRYVFAGA EKLQEPTRRL WAEKFGVRIF EGYGVTETSP
VLAVNTPVDH RSGTVGKLVP GIQYHIEPVA GIHQGGRLEV YGPNVMLGYL LHQAPGQLQP
PQTPRGKGWY DTGDIVSIDE EGYLTIRGRA KRFAKIAGEM VSLTTVEMLA ATVWPDVCHA
AISLPDAKKG EMLILLTEQR GAERRPLLLQ AKAEGLSELN VPRRILVVEK IPLLASGKVD
YTSAQRQAEQ QLPQLEETQL NS
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