Gene Noc_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2376 
Symbol 
ID3704816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2723954 
End bp2724634 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID637738859 
Productflagellar hook capping protein 
Protein accessionYP_344364 
Protein GI77165839 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACTG CGACCCCTTC CAGTTCAGAG ATTTATAAAG ATTTAGGTTT AGTCCGCCCG 
CCGGATAAAA AAGCACAAAA CACTGAGCTG GGGCTGGAGC AATTTTTGAA ATTGATGACG 
GCCCAACTTA GTAATCAGGA CCCTTTTGAG CCTATGGATA ATAGTACCTT TCTTAGTCAG 
GTAGCCCAGT TTGGAACGGT AAAAGGCATC CAGGATTTGC AAGCTTCTTT TCAAGAAGTC 
AGTGGCTCCC TGCAATCCAA CCAGGCGCTA CAGGCATCGG GATTGGTGGG CCGCTCGGTG 
CTGGTGCCCT CAGCGGAAAG TTCCCTGGAA GCGGGTGGTT CAATTCGGGG GGCGGTAGAA 
CTCCCTTCAG GTGTGGCCAG TCCACAACTG AAAATCTTTG ATCAAGCAGG GCAGTTGGTC 
AGAACCGTGG ATTTGGGGGC TGACCAAACG GGAACGGTGC AGTTTACTTG GGATGGGTTC 
AAGGAAGATG GTACTCCCGC AACCCCGGGA CGTTATCAGT TTAAGGTGGA AGGAGTAACT 
GAGGGAGGCG CGCAAGGCTT TCCGACTTTT GCAGCGGTCC GAGTGGACAG CGTGGTTATC 
GGAGAAGGCA GCGAGGGATT GACCCTCAAT TTAGCCGGGC AGGGCTCGGT ACCTTTTAGT 
CAGATTAAAC AAATTTTATA G
 
Protein sequence
MVTATPSSSE IYKDLGLVRP PDKKAQNTEL GLEQFLKLMT AQLSNQDPFE PMDNSTFLSQ 
VAQFGTVKGI QDLQASFQEV SGSLQSNQAL QASGLVGRSV LVPSAESSLE AGGSIRGAVE 
LPSGVASPQL KIFDQAGQLV RTVDLGADQT GTVQFTWDGF KEDGTPATPG RYQFKVEGVT 
EGGAQGFPTF AAVRVDSVVI GEGSEGLTLN LAGQGSVPFS QIKQIL