| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2347 |
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| Symbol | |
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| ID | 3704769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2691081 |
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| End bp | 2692463 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738830 |
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| Product | UDP-N-acetylmuramate, L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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| Protein accession | YP_344335 |
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| Protein GI | 77165810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTCC ACATTCTCGG GATTTGTGGC ACGTTTATGG CCGGCTTGGC ACTTTTAGCC
CGAGAGCGCG GATTTCATGT CAGTGGCTCG GACGCCAGTG TTTACCCTCC TATGAGCGAG
CAACTACAGG CAGCCGGTAT TGGGATTCAT GAAGGTTATA GTGCGGCGGC TTTAGATCCC
CCGCCAGATT TAGTGGTGAT AGGTAATGCG CTTTCCCGTG GTAATCCGGC TGTCGAATAT
GTTCTTGCCC AGGGACTGCC TTATACTTCA GGACCCCAGT GGCTAGCTGA GCAGATTTTA
CAGGGGCGGT GGGTGTTAGC GGTAGCGGGT ACCCATGGCA AAACGACGGC CAGCAGCCTT
CTGGCTTGGA TACTGGAATA TGCAGGCCAT GGACCAGGGT ATCTTATTGG TGGGGTTCCG
CAAAATTTTG GTGCTTCGGC CCGTTTGGGC CGGAGTCCCT ATTTTGTTGT TGAAGCGGAT
GAATATGATA CGGCATTTTT CGATAAACGC TCTAAGTTTA TTCATTATCG CCCCCGCACT
CTTATTCTAA ATAACCTAGA ATATGATCAT GCCGATATTT TTCCCCACCT AGAGGCTATC
CAACAGCAAT TTCACTATCT GGTGCGCACG GTACCTAATA ATGGCCTTAT CCTTGTTCCA
TCCGGGGATA AGGCTTTAGC AACCGTACTA AGCATGGGAT GTTGGACTCC GGTTGTGAAC
ATGGGCATAG CTGGAGGGGT TGGCTCTGCT TTAGCCGCGC GTGCCGTGGC TGATGATGGT
AGTAACTTCG AAGTTTGGTA TGAGAATTCT TGTCAAGGTC AGGTCCATTG GCCGTTGCTT
GGCCACCATA ATGTGGCGAA TGGCTTGGCG GCTATTGGCG CCGCCCGCCA TGCGGGGGTG
CCTATTGGCC AGGGTTGCCA GGCACTGGAA CGATTCCAAG GGGTACGACG GCGTCTAGAA
GTATGCGGTA AGGTAAATGG AGTTACCGTC TATGACGATT TTGCGCACCA CCCAACCGCT
ATTTCTAAGA CGTTGGCAGG ATTACGGGCA CGGGTTGGCA AAGCTCGTAT TATTGCCGTA
TTGGAGCCAC GCTCCAATAC CATGAAGCTA GGTGTCCATA AGGATAGCTT GGCACCGGCA
TTAGCGTTGG CGGATCGGGT ACTCATTTAC CAACCCTCCG ATATTAAATG GTCCTTGATT
CCCATAGTAC ACGCTCTTGG TCCTAATAAG GCATCGGCGT TTTTTGACAT TCAGGCTATT
GTGGATAATT TACGCACCTA TGTTCAAGGC GGTGATCATA TCGTGTTGAT GAGTAACGGG
AATTTTAGCC ACATTCAGCA GCAATTGTTG AAGGCTCTGC GAGAGGAGGG GGAGGGGCGT
TGA
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| Protein sequence | MHLHILGICG TFMAGLALLA RERGFHVSGS DASVYPPMSE QLQAAGIGIH EGYSAAALDP
PPDLVVIGNA LSRGNPAVEY VLAQGLPYTS GPQWLAEQIL QGRWVLAVAG THGKTTASSL
LAWILEYAGH GPGYLIGGVP QNFGASARLG RSPYFVVEAD EYDTAFFDKR SKFIHYRPRT
LILNNLEYDH ADIFPHLEAI QQQFHYLVRT VPNNGLILVP SGDKALATVL SMGCWTPVVN
MGIAGGVGSA LAARAVADDG SNFEVWYENS CQGQVHWPLL GHHNVANGLA AIGAARHAGV
PIGQGCQALE RFQGVRRRLE VCGKVNGVTV YDDFAHHPTA ISKTLAGLRA RVGKARIIAV
LEPRSNTMKL GVHKDSLAPA LALADRVLIY QPSDIKWSLI PIVHALGPNK ASAFFDIQAI
VDNLRTYVQG GDHIVLMSNG NFSHIQQQLL KALREEGEGR
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