| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2341 |
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| Symbol | hslU |
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| ID | 3704763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2685411 |
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| End bp | 2686754 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738824 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_344329 |
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| Protein GI | 77165804 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.320663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAC TAATCCCCCA GCAAGAACTA ACCCCTCGGC AAATTGTTCA GGAACTGGAT
AAACATATTA TTGGACAAAC CGCTGCTAAG CGGGCTGTTG CTGTTGCCCT CCGTAACCGC
TGGCGTCGGC GCCAGGTGAG TGAAGAGCTG CGCAACGAAA TCACTCCCAA AAATATTCTT
ATGATTGGCC CCACCGGCGT GGGTAAAACC GAGATTGCCC GGCGCCTTGC AAAACTAGCG
AATGCTCCCT TTATGAAAGT CGAAGCAACT AAGTTTACCG AAGTAGGCTA TGTTGGCCGA
GACGTAGAAT CCATCATTCG GGATCTCGTG GACATTGCCA TCAAAATAAC TCGCGAGCAG
GAAACGGCTA AGGTCCGCAA CCAAGCGGAA GATAGAGCAG AGGAGCGAAT TCTTGATGCT
CTCTTACCCG CTGCACGGGC TGCGCCCCAT GATACGATGG ATGAAGAATC AAATACTCGG
CAAAAATTTC GCAAAATGCT GCGGGAAGGA AGATTAGATG ACCGAGAAAT CGAGATTGAG
TTAGCTGCCG TTTCCATGGG GGTTGAAATT ATGGCCCCCC CAGGGATGGA AGAAATGACT
AGCCAGCTCC AAAATATGTT CCAAAATTTG GGGGGCACTC GTACCCGAGC GCGCCGACTA
CGAGTCCGCG AAGCCTTCAA GCTACTGACT GAAGAGGAGG CTGGAAAGCT CATCAATGAT
GAAGATTTAA AAGCGCGATC CCTAGAAAAT GTGGAACAAA ATGGTATTGT ATTTCTTGAC
GAAATGGACA AAATCGCCAA GCGTTCGGAA TTCTCTGGTA CAGATGTCTC CCGTGAAGGC
GTGCAGCGCG ATTTACTCCC TTTGGTAGAA GGCAGCGCGG TCTCCACAAA GTATGGTATG
GTGCGCACCG ACCATATCCT ATTTATTGCA TCTGGGGCTT TTCATCTAGC TAAGCCCTCA
GATCTCATCC CGGAAATGCA AGGACGGTTA CCCATTCGAG TTGAGCTAGG CGCCCTTAGC
GTTGACGACT TCGTACGTAT CTTAACTGAG CCGAATGCCT CTCTCACTGA GCAATATACT
GCATTATTAA AAACTGAAGG AATCTCCTTA CATTTCACCG AGGAAGGTAT TGCACATATC
GCCCAAATCG CTTGGCAGGT TAATGAACGT ACCGAGAATA TTGGTGCCCG CCGATTGCAT
ACTGTCATGG AGCGCCTCCT AGAAGGGCTC TCCTTTGAAG CGGAAAACCA TACTAGTAAA
AAAGTTATTA TTGACGCCGC CTATGTAGAT GCTCAGCTAG CCGACTTGGC CCGGGATGAA
GACTTGTCAC GCTATATCCT CTAG
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| Protein sequence | MPELIPQQEL TPRQIVQELD KHIIGQTAAK RAVAVALRNR WRRRQVSEEL RNEITPKNIL
MIGPTGVGKT EIARRLAKLA NAPFMKVEAT KFTEVGYVGR DVESIIRDLV DIAIKITREQ
ETAKVRNQAE DRAEERILDA LLPAARAAPH DTMDEESNTR QKFRKMLREG RLDDREIEIE
LAAVSMGVEI MAPPGMEEMT SQLQNMFQNL GGTRTRARRL RVREAFKLLT EEEAGKLIND
EDLKARSLEN VEQNGIVFLD EMDKIAKRSE FSGTDVSREG VQRDLLPLVE GSAVSTKYGM
VRTDHILFIA SGAFHLAKPS DLIPEMQGRL PIRVELGALS VDDFVRILTE PNASLTEQYT
ALLKTEGISL HFTEEGIAHI AQIAWQVNER TENIGARRLH TVMERLLEGL SFEAENHTSK
KVIIDAAYVD AQLADLARDE DLSRYIL
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