Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2334 |
Symbol | |
ID | 3704733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2679474 |
End bp | 2680169 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637738813 |
Product | ribosomal protein L1 |
Protein accession | YP_344322 |
Protein GI | 77165797 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000592022 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAAC TGGGTAAACG GTTAGTTGGG ATTCGAGAAA AATTAGAGCC AGGAAAGCTT TATCCGGTGG AGGAAGCTTT GAATTTGCTT AAGGAAGTTG CAAAGGTTAA ATTTGAAGAG TCAGTGGATG TCGCTGTCAA TCTTGGTGTA GATCCGCGCA AATCTGACCA GGTGGTGCGT GGTTCGACGG TACTGCCTAA TGGTCTTGGT AAAACGGTGC GGGTAGGTGT ATTTACCCAG GGTGTTAACG CTGAAGCGGC AAAAAACGCG GGGGCTGATG TGGTTGGGCT TGAGGATTTG GCTGAGACGG TGAAATCTGG TCAGATCGAT TTTGATGTGA TTATAGCATC ACCCGACGCC ATGCGTGTAG TGGGGCAGCT GGGCCCAATT TTAGGGCCTC GGGGACTGAT GCCAAACCCT AAAGTGGGGA CCGTGACTAC TGATGTGGCC GGTGCCGTGA CAAAAGCTAA AGCCGGGCAG GTTCGTTATC GGACTGATAA AGCAGGCATT ATTCATTGCT CGATAGGCAA GACATCTTTC GAAGTAGATG CGCTTAAACA GAACCTTCGG GCTTTAGTAG AGGATCTTGG AAAATTAAAG CCTGCTTCGG CAAAAGGCAT ATACCTGAAA AAACTAACTT TATCTACTAC CATGGGTCCT GGAATAGCTG TGGATCAAGC TAGCCTTCCG GTTTAG
|
Protein sequence | MAKLGKRLVG IREKLEPGKL YPVEEALNLL KEVAKVKFEE SVDVAVNLGV DPRKSDQVVR GSTVLPNGLG KTVRVGVFTQ GVNAEAAKNA GADVVGLEDL AETVKSGQID FDVIIASPDA MRVVGQLGPI LGPRGLMPNP KVGTVTTDVA GAVTKAKAGQ VRYRTDKAGI IHCSIGKTSF EVDALKQNLR ALVEDLGKLK PASAKGIYLK KLTLSTTMGP GIAVDQASLP V
|
| |