Gene Noc_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2334 
Symbol 
ID3704733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2679474 
End bp2680169 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID637738813 
Productribosomal protein L1 
Protein accessionYP_344322 
Protein GI77165797 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0081] Ribosomal protein L1 
TIGRFAM ID[TIGR01169] ribosomal protein L1, bacterial/chloroplast 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000592022 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC TGGGTAAACG GTTAGTTGGG ATTCGAGAAA AATTAGAGCC AGGAAAGCTT 
TATCCGGTGG AGGAAGCTTT GAATTTGCTT AAGGAAGTTG CAAAGGTTAA ATTTGAAGAG
TCAGTGGATG TCGCTGTCAA TCTTGGTGTA GATCCGCGCA AATCTGACCA GGTGGTGCGT
GGTTCGACGG TACTGCCTAA TGGTCTTGGT AAAACGGTGC GGGTAGGTGT ATTTACCCAG
GGTGTTAACG CTGAAGCGGC AAAAAACGCG GGGGCTGATG TGGTTGGGCT TGAGGATTTG
GCTGAGACGG TGAAATCTGG TCAGATCGAT TTTGATGTGA TTATAGCATC ACCCGACGCC
ATGCGTGTAG TGGGGCAGCT GGGCCCAATT TTAGGGCCTC GGGGACTGAT GCCAAACCCT
AAAGTGGGGA CCGTGACTAC TGATGTGGCC GGTGCCGTGA CAAAAGCTAA AGCCGGGCAG
GTTCGTTATC GGACTGATAA AGCAGGCATT ATTCATTGCT CGATAGGCAA GACATCTTTC
GAAGTAGATG CGCTTAAACA GAACCTTCGG GCTTTAGTAG AGGATCTTGG AAAATTAAAG
CCTGCTTCGG CAAAAGGCAT ATACCTGAAA AAACTAACTT TATCTACTAC CATGGGTCCT
GGAATAGCTG TGGATCAAGC TAGCCTTCCG GTTTAG
 
Protein sequence
MAKLGKRLVG IREKLEPGKL YPVEEALNLL KEVAKVKFEE SVDVAVNLGV DPRKSDQVVR 
GSTVLPNGLG KTVRVGVFTQ GVNAEAAKNA GADVVGLEDL AETVKSGQID FDVIIASPDA
MRVVGQLGPI LGPRGLMPNP KVGTVTTDVA GAVTKAKAGQ VRYRTDKAGI IHCSIGKTSF
EVDALKQNLR ALVEDLGKLK PASAKGIYLK KLTLSTTMGP GIAVDQASLP V