| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2331 |
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| Symbol | |
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| ID | 3704730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2673930 |
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| End bp | 2678009 |
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| Gene Length | 4080 bp |
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| Protein Length | 1359 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637738810 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_344319 |
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| Protein GI | 77165794 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTACT CGTTGACCGA GAAGAAGCGT ATTCGTAAGG ATTTTAGCAA GCTCCATAGT
ATACTGAAAA CTCCTTTCTT GTTAACTATA CAAATCGGCT CTTTCCTAGA TTTTCTACAA
ATGGATGTGC CTCCTGGTAA GAGGAAAGAT AAAGGGTTGC ATGCCGCATT TAAGAGTGTT
TTTCCTATCA AGAGCTATAC AGAGTATGCT GAGCTACAGT ATAGCAGCTA TCATCTTGGT
GTTCCCTCAT TTGAGGTTAA GGAATGCCAA GTACGCGGTC TAACTTACGC GGCGCCTCTG
CGGGTTAAGT TGCGCCTTGT TATTTATGAC AAAGAATCTC CTGCTAGCGA GCAAGTGGTT
AAGGATGTAA AAGAGCAGGA AGTGTACATG GGCGAGATCC CCTTGATGAC GCCAAAAGGG
AATTTTGTTA TTAATGGAAC AGAGCGGGTT ATCGTCTCTC AATTGCACCG TTCTCCAGGA
GTTATCTTCG AACATGATAA GGGAAAGACC CATTCCTCAG GAAAATTACT TTTTTCTGCT
AGGATAATCC CCTATCGTGG ATCTTGGCTC GATTTTGAAT TTGATCCTAA GGATTGCGTC
TATGCGCGTA TTGATCGTCG ACGTAAATTA CTAGCGACTA TATTGTTACG CGCCCTCGGT
TACAGCACCG AGGAAATTCT AATTATGTTC TTTGAAACGA TTTCGGTTAA GCGCCAAGGT
TCAAGCTATT TATTAGACTT GGTGCCTCAG CGGCTTCGGG GTGAGTCGCT GCCTTTTGAT
ATCGCTAGCC CAGATGGCGA GGTCATCGTT GAAGCAGGAC GAAGGGTTAC TGCGCGCCAT
ATCAAGCAGA TGGAAAAGGC TGGAATGAAG ACTCTACCCG CGCCTAAGGA GTTTTTAATA
GGAAAAACTC TAGCTCGGGA TCTGATTGAT GCTGGTACCG GAGAAGTATT AGCTAAAGCG
AATGATGAAA TTACAGCGGA ATTAATGACG GCCCTAGAAG ACGCTAATAT ACAAGCCTTT
GATCTTATTT ATACTAACGA TTTGGACCGT GGCTCCTTTA TCTCCGATAG TTTGCGCTTA
GATCCTACCA CTACACCACT AGAAGCCCAG ATGGAAATCT ATCGTGTAAT GCGTCCTGGA
GAGCCGCCGA CTAAGGAAGC AGCGCAGAAT CTATTTCAAA ATTTGTTTTT CAACCCAGAA
CGTTACGATC TCTCTCCGGT GGGCCGAATG AAATTTAATC GCCGTCTGGG GAAAGAAGAT
ATTACTGGCC CAAGTATATT ATCCAAAGAA GATATTGTCG ATGTTATAAA GACTCTAGTC
GATATCCGTA ATGGTTACGG CAGTGTGGAT GATGTTGATC ATCTGGGCAA TCGCCGGGTG
CGTAGTGTTG GAGAAATGGC GGAAAATCAA TTTCGCGTAG GTTTGGTGCG AGTCGAGCGG
GCGGTGCGGG AGCGTTTGAG TTTAGCGGAG TCGGAGGGGT TAATGCCTCA GGAATTGATT
AACGCAAAAC CCGTATCGGC CGCGGTTAAG GAGTTTTTTG GCTCTAGCCA GTTATCGCAG
TTTATGGATC AGAATAATCC TTTATCCGAG GTGACTCATA AACGACGGGT ATCTGCGCTA
GGACCAGGAG GATTGACTCG TGAGCGGGCT GGTTTTGAGG TGCGTGATGT GCATCCTACT
CATTACGGAC GCGTCTGCCC CATCGAGACT CCGGAAGGCC CCAATATTGG TTTGATTAAT
TCTTTAGCGG TTTATGCCCG AATTAATCAA TATGGTTTTA TTGAAACACC ATACCGAAAA
GTAGTGGATG GCAAGGTGGC TGGCGAAGTG GACTATCTTT CGGCTATTGA GGAAGGACAG
TACGTAATTG CTCAGGCGAA TGCGGCTGCG GATGAAGAAG GGCGCCTCAT TGATATGTTA
GTTTCTTGCC GTCACAAGAA TGAATTTACA CTTCTACCAC CTGAAAAAGT GCAGTACATT
GATGTATCAC CTAAACAAAT CGTATCGGTA GCGGCATCTT TAATTCCTTT TTTAGAGCAC
GATGATGCCA ACCGTGCATT GATGGGATCT AACATGCAGC GCCAGGCAGT GCCCACCTTG
CGGGCGGAAA CTCCTCTAGT AGGTACTGGT ATGGAGCAAG TTGTAGCTCG TGATTCAGGA
GTGATGGTGG TTGCTCGCCG TGGCGGTATC GTAGATTCTG TGGATGCAGC TCGCGTTGTC
GTACGAGTCA ATGACGAAGA AACGGCTTCC GATGAGCCCG GAGTTGATAT TTATAACCTC
ATTAAGTATG CCCGCTCGAA TCAAAACACA TGCATCAACC AGAGTCCGTT AGTAAAGCCG
GGCGATACGG TGGCTATAGG TGATGTGCTG GCTGATGGCC CTTCGACAGA CATGGGTGAA
TTAGCTTTGG GGCAGAATCT TCTTGTCGCC TTTATGCCTT GGAATGGTTA TAACTTTGAG
GATTCTATCC TTATTTCCGA GCGGGTGGTG GAAGAAGATC GCTTTACTTC GATTCATATT
GAAGAGCTGA CTTGCTTTGC TCGGGATACT AAGTTAGGAC CAGAGGAGAT TAGCAGCGAT
ATTCCGAATG TAAGCGAGGC GGCGTTATCT AAGCTGGATG AGGCGGGTAT TGTTTATATT
GGTGCTGAGG TGAAACCCGG CGATATTTTG GTTGGCAAGG TAACTCCCAA AGGGGAGACT
CAATTGACAC CGGAGGAAAA GCTCTTACGA GCTATCTTTG GGGAAAAGGC ATCTGATGTA
AAGGACACAT CTCTACGAGT GTCTTCAGGT ATGCAGGGTA CCGTCATTGA TGTCCAGGTC
TTCACCCGTG ATGGCGTGGA AAAGGATACT CGGGCCTTAG AGATAGAGGA GATGGAGCTT
GCTAAAATCA AAAAGGATTT GCGGGATGAA TTTCGTATTG TAGAGACTGA TATTTATCAA
CGCCTAGAGA AAGTGTTAGT AGGTAAGACA GTCGAAGGAG GACCGGCAGA ATTAAAAGCG
GGAACCCAAA TTACCCAAAA TTACCTTGCT GATTTACCCA GGGAACGATG GTTTGAGATT
AGACTACGTA GCGAGGAGGC TGGTAGGCAG CTGGAATCAG TTGCTGGGCA GCTTAAGGAA
CAACGGGTTG CAATGGATGA AAAATTCCAG CAGCAACGTG CCAAGCTCAC TTCCGGGCAT
GACCTCCCCC CTGGTGTCCA AAAAATGGTG AAGGTCTATT TAGCCGTAAA GCGCCGTGTC
CAACCCGGTG ATAAGATGGC GGGTCGACAT GGAAATAAGG GAGTGATTTC CACCATCGTA
CCTATTGAAG ACATGCCCTA TATGGAAGAT GGGACTCCAG TAGATATCGT GCTTAATCCT
CTAGGGGTGC CTTCTCGGAT GAATATTGGG CAGATCTTAG AAACCCATCT GGGATGGGCG
GCAAAGGGCT TGGGTCGAAA AATTGGCGCT CTCCTTGAGT CGGGAGAACA GGCTTCTGAA
CTGCGTGTTT TCTTAGATCG GATATATAAC GCTAGTGGCA AGAAAGAAGA CCTAAATTCT
TTGAGCGATG AAGAGGTATT GGAGCTTGCA AATAACCTGA AGGATGGGGT TCCTATGGCG
ACACCGGTAT TCGATGGCGC TTCCGAGCAA GAAATTAAAA CTATGCTGGA GTTGGCTGAC
TTGCCTACTA ATGGACAGAC AAATCTTTAT GATGGTAGGA GTGGAGAAGC CTTCGCCCGT
CCAGTAACGG TAGGATATAT GCATATGCTT AAATTGAATC ATTTAGTTGA TGATAAGATG
CATGCTCGTT CGACGGGTCC TTATAGCTTA GTTACTCAGC AGCCTTTGGG GGGGAAAGCC
CAGTTTGGCG GGCAGCGTTT TGGTGAGATG GAGGTATGGG CCTTAGAATC CTACGGTGCG
GCCTATACTT TGCAGGAAAT GCTTACTGTG AAATCCGACG ATGTGAACGG GCGCACCAAG
ATGTATAAAA ACATCGTAGA TGGTGATTAC CGTATGGAAG CGGGTATGCC GGAATCTTTT
AATGTATTGA CCAAAGAAAT TCGTGCCCTC GGTATCGATA TTGAACTGGA ACAAGATTAA
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| Protein sequence | MPYSLTEKKR IRKDFSKLHS ILKTPFLLTI QIGSFLDFLQ MDVPPGKRKD KGLHAAFKSV
FPIKSYTEYA ELQYSSYHLG VPSFEVKECQ VRGLTYAAPL RVKLRLVIYD KESPASEQVV
KDVKEQEVYM GEIPLMTPKG NFVINGTERV IVSQLHRSPG VIFEHDKGKT HSSGKLLFSA
RIIPYRGSWL DFEFDPKDCV YARIDRRRKL LATILLRALG YSTEEILIMF FETISVKRQG
SSYLLDLVPQ RLRGESLPFD IASPDGEVIV EAGRRVTARH IKQMEKAGMK TLPAPKEFLI
GKTLARDLID AGTGEVLAKA NDEITAELMT ALEDANIQAF DLIYTNDLDR GSFISDSLRL
DPTTTPLEAQ MEIYRVMRPG EPPTKEAAQN LFQNLFFNPE RYDLSPVGRM KFNRRLGKED
ITGPSILSKE DIVDVIKTLV DIRNGYGSVD DVDHLGNRRV RSVGEMAENQ FRVGLVRVER
AVRERLSLAE SEGLMPQELI NAKPVSAAVK EFFGSSQLSQ FMDQNNPLSE VTHKRRVSAL
GPGGLTRERA GFEVRDVHPT HYGRVCPIET PEGPNIGLIN SLAVYARINQ YGFIETPYRK
VVDGKVAGEV DYLSAIEEGQ YVIAQANAAA DEEGRLIDML VSCRHKNEFT LLPPEKVQYI
DVSPKQIVSV AASLIPFLEH DDANRALMGS NMQRQAVPTL RAETPLVGTG MEQVVARDSG
VMVVARRGGI VDSVDAARVV VRVNDEETAS DEPGVDIYNL IKYARSNQNT CINQSPLVKP
GDTVAIGDVL ADGPSTDMGE LALGQNLLVA FMPWNGYNFE DSILISERVV EEDRFTSIHI
EELTCFARDT KLGPEEISSD IPNVSEAALS KLDEAGIVYI GAEVKPGDIL VGKVTPKGET
QLTPEEKLLR AIFGEKASDV KDTSLRVSSG MQGTVIDVQV FTRDGVEKDT RALEIEEMEL
AKIKKDLRDE FRIVETDIYQ RLEKVLVGKT VEGGPAELKA GTQITQNYLA DLPRERWFEI
RLRSEEAGRQ LESVAGQLKE QRVAMDEKFQ QQRAKLTSGH DLPPGVQKMV KVYLAVKRRV
QPGDKMAGRH GNKGVISTIV PIEDMPYMED GTPVDIVLNP LGVPSRMNIG QILETHLGWA
AKGLGRKIGA LLESGEQASE LRVFLDRIYN ASGKKEDLNS LSDEEVLELA NNLKDGVPMA
TPVFDGASEQ EIKTMLELAD LPTNGQTNLY DGRSGEAFAR PVTVGYMHML KLNHLVDDKM
HARSTGPYSL VTQQPLGGKA QFGGQRFGEM EVWALESYGA AYTLQEMLTV KSDDVNGRTK
MYKNIVDGDY RMEAGMPESF NVLTKEIRAL GIDIELEQD
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