Gene Noc_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2323 
Symbol 
ID3704722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2663553 
End bp2664173 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID637738802 
Productribosomal protein L4/L1e 
Protein accessionYP_344311 
Protein GI77165786 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0012561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCTCG CAGTGCAGTC GCTCGCAGAA AATTCTGAAA CGGGTATGAC GCAACTTTCT 
GATACTGTGT TTACCCAACA CTTTAATGAG CCTCTTATCC ATCAAGTGGT CACTGCTTAT
TTGGCTAAAG CTCGAGCAGG TACACATGCT CAGAAAACGC GTTCCGAGGC TCGAGGCGGT
GGTGCTAAAC CTTTTCGGCA AAAAGGGACA GGCCGCGCTC GGGCGGGTAC TATTCGAAGC
CCGTTATGGC GAGGTGGCGG TAGGGCTTTT GCCGCCAAGC CAGGGGATTA TTCGCAAAAG
GTAAATAGAA AAATGTATCG AGCGGCTATG CGCTCGATTT TATCGGAGCT TGTGCGCCAA
GACCGGCTAA GGATGATAGA TAAAATTATG CTTTCCAAGC CGAAAACAAG AGATCTAGCT
AAGTTATTAA AGCCCATTAC GTGGCGCAGT GTGTTGATCG TGGTTGCTGA AGATGATCGT
AATCTTGAAT TGTCCGCCCG GAATATTCCG ACAGTGGCTA TAAGGAATGT GAGTAGAGTT
AGTCCTGTTG AATTAATTCG ATTCGATGGA GTTCTGGTAA CGGGAGATGC AATTCGTTGT
TTTGAGGAGA GCCTCACATG A
 
Protein sequence
MNLAVQSLAE NSETGMTQLS DTVFTQHFNE PLIHQVVTAY LAKARAGTHA QKTRSEARGG 
GAKPFRQKGT GRARAGTIRS PLWRGGGRAF AAKPGDYSQK VNRKMYRAAM RSILSELVRQ
DRLRMIDKIM LSKPKTRDLA KLLKPITWRS VLIVVAEDDR NLELSARNIP TVAIRNVSRV
SPVELIRFDG VLVTGDAIRC FEESLT