| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2317 |
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| Symbol | rplP |
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| ID | 3704543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2660639 |
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| End bp | 2661052 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738796 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_344305 |
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| Protein GI | 77165780 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000221172 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACAGC CGAAAAGAAC TAAGTTCCGT AAGCAGCAAA AAGGCAGAAA TCGCGGACAA
GCCCTCCGAG GTAGCCAAAT AGACTTTGGT GAGTATGGCT TGAAAGCTAT AGGTAGAGGG
CGGATTACAG CTCGCCAAAT CGAGGCTGCT CGGCGTGCTA TGACAAGGCA TATTAAGCGG
GGCGGAAAAA TTTGGATTCG GATTTTTCCG GATAAACCAA TTACTCAAAA GCCTCTTGAG
GTGCGTCAAG GAAAGGGTAA GGGTGGTGTA GAGTTTTGGG CTGCTAATAT ACAGCCTGGC
CGCGTCCTTT ATGAGATGGA AGGTGTGCCG GAGGGGGTAG CGCGGAGGGC TTTTGAATTA
GCGGCTGCTA AACTGCCCAT TAAAACGGTA TTTGTTACCC GGGCGATTAT GTGA
|
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| Protein sequence | MLQPKRTKFR KQQKGRNRGQ ALRGSQIDFG EYGLKAIGRG RITARQIEAA RRAMTRHIKR
GGKIWIRIFP DKPITQKPLE VRQGKGKGGV EFWAANIQPG RVLYEMEGVP EGVARRAFEL
AAAKLPIKTV FVTRAIM
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