Gene Noc_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2309 
Symbol 
ID3704535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2657514 
End bp2658050 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID637738788 
Productribosomal protein L6 
Protein accessionYP_344297 
Protein GI77165772 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000583709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGAA TTGCTGATAA TCCCGTGTCG ATCCCGAAGG GGGTCGAAGT CACGCTTTCT 
GGGGATAATG ACATTAAGGT AAAGGGTGCA AAGGGTTCTC TTGCTTTTGC TATTCATCCC
TTGATACAGG TAGTCCAAGA TGGGGAAACG CTACGCTTTT CAGCGAAGAG TACAGATAAG
CGAGTAAATG CTCTTAGAGG TACGACCCGC GCCCTAATAA ATAATATGGT ACAGGGAGTT
AGCCAAGGCT TTGAGCGGCG TTTGCAGCTA GTTGGGGTGG GTTACCGGGC GCAGCTACAA
GGGCGGAAGC TTGTGCTTAG TTTGGGTTAT TCTCATCCCG TTGAATTTAC TGCGCCAGAG
GGTCTTACTA TTGAGGTACC TAGTCCGACC GAAATCATCG TCAAAGGATA TGATAAGCAG
CAAGTCGGAC AGGCTGCGGC GAACATTCGC AGATTCAGGC CACCTGAACC TTATAAGGGA
AAAGGGGTTC GCTATGCAGA CGAAGTAGTT GTGCGCAAGG AAGCGAAGAA AAAATAG
 
Protein sequence
MSRIADNPVS IPKGVEVTLS GDNDIKVKGA KGSLAFAIHP LIQVVQDGET LRFSAKSTDK 
RVNALRGTTR ALINNMVQGV SQGFERRLQL VGVGYRAQLQ GRKLVLSLGY SHPVEFTAPE
GLTIEVPSPT EIIVKGYDKQ QVGQAAANIR RFRPPEPYKG KGVRYADEVV VRKEAKKK