Gene Noc_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2306 
Symbol 
ID3704532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2655984 
End bp2656418 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID637738785 
Productribosomal protein L15 
Protein accessionYP_344294 
Protein GI77165769 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000818267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAA ATACGATCTC TTCAGCTCCC GGTGCCAAGC AGGCGGAAAA GCGCGTTGGC 
CGCGGCATTG GATCTGGCTG GGGCAAAACT TGTGGTCGTG GGCATAAGGG CCAAAAATCG
CGATCAGGAG GTTTTCATAA GGTTGGCTTC GAGGGCGGTC AGATGCCCTT ACAAAGGCGC
GTTCCTAAAT TTGGCTTTAG TTCGCGTAAG GCTCGTTTCA GAGTTGAGGT GCGCTTAGAC
CAGCTTACAA AAGTAAACAC TGATACGGTA GATATTGCCG CCCTTGTGAA AGCCAGATTG
ATTCCAAAAT GGGCTAAACG GGTTAAAGTG ATTGCGTCGG GTAAGCTTGA TAAGCCGGTA
AGTCTGCAGG GAATTATGGT ATCTGCAGGC GCACGCAGAG CTATTGAAGC GGCAGGCGGC
CGCATCGGAG AGTAA
 
Protein sequence
MRLNTISSAP GAKQAEKRVG RGIGSGWGKT CGRGHKGQKS RSGGFHKVGF EGGQMPLQRR 
VPKFGFSSRK ARFRVEVRLD QLTKVNTDTV DIAALVKARL IPKWAKRVKV IASGKLDKPV
SLQGIMVSAG ARRAIEAAGG RIGE