| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2283 |
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| Symbol | |
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| ID | 3704489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2635441 |
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| End bp | 2637327 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738762 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_344271 |
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| Protein GI | 77165746 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0415043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAA ATTACGATGC TGCCGCGATA GAAGTACTCA CGGGCTTGGA TCCGGTACGC
AAGCGGCCAG GAATGTATAC CGATACCCAA CGGCCTAATC ATTTGGCTCA GGAGGTCATT
GATAATAGCG TCGATGAGGC CATTGCAGGA TTCGCTACCC AGATCGATGT CGTGCTTCAA
CCAGATGGTT CCTTAACAGT GTGTGATGAC GGACGGGGAA TGCCAGTGGA TCTGCATCCA
GAGGAGCGGT TGCCAGGAGT AGAGGTGATT CTTACCCGAC TCCATGCGGG TGGTAAATTC
TCTTCTAAAA GTTATCGCTT CGCGGGAGGG TTGCACGGGG TAGGGGTTTC GGTGGTGAAC
GCCCTTTCCT CGCGCCTGGA GGTTTGGGTG CGGCGCGAGG GCTGTGAATA TCATATCGCT
TTTGCTAATG GTGAACGGGT TTCCGCTTTA AAAGCGATCA ATAAGGTAGG TAAGCGCAAT
ACGGGCACCG TTCTGCGTTT CTGGCCAGAT CCGGTATTTT TCGATACCCC TAAATTTGCT
GTGGCGCGGC TTAAGCATAT TTTACGCGCC AAAGCGGTGC TATGCCCCGG TCTTTGCGTG
ACCTTCAGCG ATGTTGCTAC CGGAGAGACG GTCAATTGGC GTTACCAAGA GGGACTTTTA
GCTTATCTCA GAGATGAGTT AAGAGAGCTC TCGTACTTGC CTGACCCCCC TTTTACCGGA
GAAATGCAAG GTAATACTGA AGAAGTCTGT TGGGCGTTTA CTTGGTTGCC TGAAGGGGGC
GAGGTGGTGA CGGAAAGCTA CGTTAATTTG ATTCCAACGC CCCAGGGAGG CACTCATGTC
AATGGCTTGC GGGCGGGGAT GCTGGAGGCA GTGCGAGAGT TTTGTGAGTT TCGGAATCTT
CTGCCAAAGG GCGTAAAACT GGCCCCGGAT GATGTTTGGG ATCGAGTGAG TTATGTGCTT
TCGGTGAAGC TTCTCGACCC TCAGTTTTCT GGGCAAACTA AAGAACGCTT GTCTTCTCGG
GAATGCGCTA GTTTTGTTTC TGGAGTTGTC AAAGATTCTT TTAGTCTATG GCTTAATCAG
CATGTCGTCA CTGGAGAGAC GATTGCAGAA TTGGCGATTG GCAATGCCCA GCGGCGTTTA
CGCCAGGCCA AAAAAGTGGT TCGCAAGCGT ATTCAAGCTG GCCCTGCACT GCCGGGAAAA
TTAGCGGACT GCACCAGTCA GGAGGTAAGT CTTACGGAGC TTTTTCTGGT GGAGGGGGAT
TCAGCCGGCG GCAGTGCGAA ACAGGGGCGG GACCGGGTAT TTCAAGCTAT CATGCCCCTT
CGTGGGAAAA TCCTCAATAC TTGGGAGATA GATTCAGCCC AGGTGCTGGC TTCCCAAGAA
GTGCATAATA TTGCGGTGGC GCTGGGTGTA GATCCTGGCT CGGATAAACT TGATAGCTTA
CGCTACGGTA AAATCTGTAT TCTTGCTGAT GCCGATTCCG ATGGCGCCCA TATTGCCGCC
TTACTTTCGG CGCTATTCTT TCGGCATTTT CGGCCGCTGG TTGAGGCGGG CCACATTTAT
GTGGCGATGC CACCCCTTTA TCGCATCGAT GTCGGGAAGC GCGTTTTCTA TGCCCTTGAC
GAGGCGGAAC GACAAGGAGT GCTCGATCGG ATTGCTGCTG AAAGAATTAA AGGAAAAATT
AATATCCAGC GTTTTAAAGG ATTGGGAGAG ATGAATCCCA TGCAGTTGCG GGAGACTACC
ATGGCGCCAG AGACGCGACG ATTAGTGCGT TTGACGGTGA CTCCTAATGA TGATCCGGAC
CAGTTGCTGG ATCGGTTGTT AGCCAAGCGC CGCGCTGCGG ATCGCAGGCG ATGGCTGGAA
GAAAGCGGTA ATTTAGCCGA GCTATGA
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| Protein sequence | MSGNYDAAAI EVLTGLDPVR KRPGMYTDTQ RPNHLAQEVI DNSVDEAIAG FATQIDVVLQ
PDGSLTVCDD GRGMPVDLHP EERLPGVEVI LTRLHAGGKF SSKSYRFAGG LHGVGVSVVN
ALSSRLEVWV RREGCEYHIA FANGERVSAL KAINKVGKRN TGTVLRFWPD PVFFDTPKFA
VARLKHILRA KAVLCPGLCV TFSDVATGET VNWRYQEGLL AYLRDELREL SYLPDPPFTG
EMQGNTEEVC WAFTWLPEGG EVVTESYVNL IPTPQGGTHV NGLRAGMLEA VREFCEFRNL
LPKGVKLAPD DVWDRVSYVL SVKLLDPQFS GQTKERLSSR ECASFVSGVV KDSFSLWLNQ
HVVTGETIAE LAIGNAQRRL RQAKKVVRKR IQAGPALPGK LADCTSQEVS LTELFLVEGD
SAGGSAKQGR DRVFQAIMPL RGKILNTWEI DSAQVLASQE VHNIAVALGV DPGSDKLDSL
RYGKICILAD ADSDGAHIAA LLSALFFRHF RPLVEAGHIY VAMPPLYRID VGKRVFYALD
EAERQGVLDR IAAERIKGKI NIQRFKGLGE MNPMQLRETT MAPETRRLVR LTVTPNDDPD
QLLDRLLAKR RAADRRRWLE ESGNLAEL
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