| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2281 |
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| Symbol | |
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| ID | 3705073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2631275 |
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| End bp | 2633167 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738760 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_344269 |
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| Protein GI | 77165744 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAAAGC GTGAAATCGG CCCTTTTTTG CAGGCCCAAA AGCGACGGGC CGTGGTCATT
GTGCATGATG TCACTGCCGT CTGTTTGGCC TGGGTGTTAA GTTACCTTAT TCGTTACAAT
TTATCGCCTT ATTGGGTGGA CTGGGAGACT TGCCTCAGCA CCTTGCCGGT GATCGTGGTG
GTCCAAAGCA TCGTCTTGAT TTGGATAGGG CTTTATCGGG GCTTGTGGCG CTTTGCGAGC
ATTCCTGATT TATTAAACAT CATTCGCGCC GTAGGTTACG GAGCCCTTTT AGTTGCGCTA
ACGCTTTTTC TTATCAACCG CCTCAACGGC GTACCCCGCA GTGCATTGCT GCTTTATCCT
ATCTTTTCTT TACTGCTGCT GGCAGGTCCC CGGCTTGCCT ACCGGGTGTG GAAAGATCGC
CGTCTTACCC TGGCTGCAAG TCCTCATCGA AAACGAGTCT TAATTTTGGG AGCTGGCCGT
GCTGGTGATT TGCTGGTCCG TGATATGCTT GTGGAGGGGC ACTACCTGCC GGTGGCTTTT
CTAGATGATC GGCCTGATCT GATAGGCCGG CAAGTGCGAG GAATTCCAGT AGTGGGGTTG
TTAGCGCAAT TGCCTGCCAA GGTGGGTGAG ATGGCTGCAG ATGTGGTGGT GATTGCGATG
CCTTCTGCTA ATAACCAGCA GATGCGCCGT GCTGTTTCGC TCTGTGAGCA GGCCCAAGTA
CCTTATCGGA CTTTACCCCG TCTGCAAGAT TTGGTTGCGG GTCGGGCGAG CATCAAGGAG
CTTCGAGAAG TTGCCATTGA CGATCTATTG GGGCGGGACG AAATATTTTT GGATTGGGAT
TATATCCGCC GAGACTTGGA AGCTAAATCC CTGTTGGTCA GTGGCGGAGG AGGATCGATC
GGATCCGAAC TTTGCCGGCA ATTAGGGCGC CTTGGGCCCG CTTCCCTTAT TGTCATCGAT
AATAGCGAAT ATAAGCTCTA TCGCCTCGAA CAGGAGTTGC GGCAGAAACT CCCGGCTCTC
AATCTCCACG CTTATTTATG TGATGTGCGT GATGAAGCTG GTGTGAAGGA GATCCTAGCG
CGTCATCTGC CAGAGGTGGT GTTCCATGCA GCAGCTTATA AACATGTACC CCTCCTAGAG
AGGCAAGCAC GGCAGGCTGT GCGAAACAAT ATTTTTGGAA CCCGCTGTTT AGCCGAGGCG
GCAAGGCAAG CAGGCTGTGG AACTTTCGTC CTGATTTCAA CCGACAAAGC GGTTAATCCA
ACGAGTGTGA TGGGCACCAG CAAGCGAGTT GCGGAGCTTC TCTGCCAAGA TCTTAACCGA
CACAGCCAAA CTCGGTTTAT CGTCGTGCGT TTTGGCAATG TGCTTGGATC AGCAGGGAGC
GTGGTGCCGT TATTCCAGGC CCAAATTGCC GCCGGTGGGC CGATCACGGT GACCCATCCC
GAAATGACCC GCTATTTCAT GACTATTCCC GAGGCATGCC ACTTGATTAC CCAAGCCGCT
ATGATAGGCA AAGGAGGGGA GATATTCGTC CTGGATATGG GCGAGTCGGT TAAAATTATC
GAACTTGCTG AGCAAATGAT CCGCCTTTCT GGCCAGGAAC CGGCAGTAGA AATCATTTAT
ACGGGGCTGA GGCCGGGGGA AAAACTCCAT GAGGAATTAT TTTATGCCCA TGAATCTCCT
GTACCTACCC AATCGCCGAA GATATTGCTA GCACGGCATG GTGCTACCGA CTGGAGACGC
TTGGAAAGCG GACTGGATGA GTTAGAGAAA GCCTGTGGGC TGGGAGAGGA ATGGCAGGTG
AAGCAGGTGT TAGCGCGCCT ATTGCCGGAG GTGAGGGCGG AGGCTAAATT GCAACAGGTG
GGTTCTAAAG TAATTGCAAT CAACAGGAGT TAA
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| Protein sequence | MPKREIGPFL QAQKRRAVVI VHDVTAVCLA WVLSYLIRYN LSPYWVDWET CLSTLPVIVV
VQSIVLIWIG LYRGLWRFAS IPDLLNIIRA VGYGALLVAL TLFLINRLNG VPRSALLLYP
IFSLLLLAGP RLAYRVWKDR RLTLAASPHR KRVLILGAGR AGDLLVRDML VEGHYLPVAF
LDDRPDLIGR QVRGIPVVGL LAQLPAKVGE MAADVVVIAM PSANNQQMRR AVSLCEQAQV
PYRTLPRLQD LVAGRASIKE LREVAIDDLL GRDEIFLDWD YIRRDLEAKS LLVSGGGGSI
GSELCRQLGR LGPASLIVID NSEYKLYRLE QELRQKLPAL NLHAYLCDVR DEAGVKEILA
RHLPEVVFHA AAYKHVPLLE RQARQAVRNN IFGTRCLAEA ARQAGCGTFV LISTDKAVNP
TSVMGTSKRV AELLCQDLNR HSQTRFIVVR FGNVLGSAGS VVPLFQAQIA AGGPITVTHP
EMTRYFMTIP EACHLITQAA MIGKGGEIFV LDMGESVKII ELAEQMIRLS GQEPAVEIIY
TGLRPGEKLH EELFYAHESP VPTQSPKILL ARHGATDWRR LESGLDELEK ACGLGEEWQV
KQVLARLLPE VRAEAKLQQV GSKVIAINRS
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