| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2276 |
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| Symbol | lspA |
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| ID | 3705068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2625545 |
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| End bp | 2626009 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637738755 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_344264 |
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| Protein GI | 77165739 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAAAT GGTTGTGGCT CTCTACGCTG GTGATTCTGC TGGATCAAGG GACTAAGTAT
CTGGCGGAAA ATCGGTTGCA GCCTTACGAG CCGATCCCAG TGGTTCCTTT TTTTAATTTT
ACCTTAGCTT ACAATACCGG CGCGGCGTTT AGTTTCCTGG CCGATGCCGG TGGTTGGCAG
CGGTGGTTTT TTGTAGGGCT GGCGCTCACT GTAAGCGTTG GACTAGTTGT TTGGTTATAC
CGGTTAGGCA CCCATGCTCT GTGGGAAGGC ATGGCTGTGG CCTTGATCCT TGGCGGAGCC
TTGGGTAATG TGATAGACCG CCTCTGGCAT GGTCATGTCA TTGATTTTAT TGATTTATAT
TACCAAGGCT GGCATTGGCC CGCCTTTAAT ATTGCTGATT CCGCCATTAC TGTGGGCGCA
GCGGTTCTCA TTATACAAAG TCTGTTTAGC AAACCAGCTA GCTGA
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| Protein sequence | MLKWLWLSTL VILLDQGTKY LAENRLQPYE PIPVVPFFNF TLAYNTGAAF SFLADAGGWQ
RWFFVGLALT VSVGLVVWLY RLGTHALWEG MAVALILGGA LGNVIDRLWH GHVIDFIDLY
YQGWHWPAFN IADSAITVGA AVLIIQSLFS KPAS
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