| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2274 |
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| Symbol | |
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| ID | 3705066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2620535 |
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| End bp | 2624947 |
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| Gene Length | 4413 bp |
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| Protein Length | 1470 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738753 |
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| Product | fimbrial assembly protein |
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| Protein accession | YP_344262 |
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| Protein GI | 77165737 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.211915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAA AGTTTCGACT TAACCTCCCC GCTTACTACG CTGCAGCTGC CGCCCTTGCC
CTGGGTTATG TTGGCAATAC CCAGGGAGCC AATCTGAATC TGAATAATAA ACCTCTGTTT
CTCACAGACA ATGCCCCTCC TCTCACCATG CTAGTGATGG GAAAAGATCA TAAGCTTTAC
TATGAAGCTT ATAACGATGC TTCCGATCTA GACGGAGATG GCACCATCGA GATTGGCTAC
AAGCCCGCGC GTGTGGACTA CTACGGTTAT TTCGACTCCC ACAAATGCTA TGTTTACAGC
GGCAACCGCT TTGAGCCCAG TACCGCCGCC AGCGACAAAA CCTGCTCCGG TGCCTGGAGC
GGAGATTTTC TGAATTACCT TACCACCTCC CGCATGGATG CCCTGCGGAA AGTGTTCTAC
GGTGGGCAGC GGGATATCGA CACGGCTTCG GAAACTGTTT TGGCGGGAGC GTTCATTCCC
CAGGATGCCC ATAGCTGGGG CAAGGAATAC ACCAGCATTG CCGTGGACGG ATATGATCTC
AACCACTACG CTCCACTTAC TTTACCCAAT GCAGGAAAGC GGCATCTGTT CGCGGTCACC
AGCCTTGCCG ATGGCAACAT CCCGGTCCTG CGAGTTTTGC AAGATAAATC GGAACGTATC
TGGGAATGGG TCAGCAAAGA AAAGCCCGTG GCCGATGACT CTTTGGGCAC GCCAGATGAT
TATTCGATCC GGATACTGGC CTGCTCCTCT TCCTTGCCAG AGATAAACTG CCAGCAATAC
GGTGCCTCTT CTTACAAACC CACTGGGCTA CTGCAAAAAT ACGGCGAAAA CGACAGTATG
TACTTTGGCC TGCTCACCGG CTCCTATGCC AAGAACACTT CCGGCGGGGT ATTAAGAAAA
AAGGTGGGGA GTATTACTGA TGAAATCGAT CCTGGCACCG GGGTCTTTAC CACCACCAAC
GGCATCATCA AAACCATTGA TAATCTGAGG ATTATTCAGT TTCTTTATGG GAAGAAACCT
GCCTATAGCC CCGGCTGGCC GGAAGCTTGG ATCACTACCC GCCCCATGAC TGAAGGGGAA
CAACCCAATT GGGGCAATCC CATCGCCGAA ATGATGTATG AAGGGCTGCG CTATTTTGCC
GGCAAAGCAT CCCCCACCCC GGCCTATTCC ATTGGGGCCG GTACCTCCCC GGATGCGGAT
CTGGGGCTAC CTGTGGCTAC CTGGGATGAT CCCTATGCCA GCGGCAACTT TCCAAGCTGC
TCCAAGCCTT TCCAGATTGT CATCAGCGAT ATTAATCCCT CCTATGACAC TGATCAGCTC
CCAGGAAGCT ATTTTTCCAG CTTCACAGGA GATGTTTCCG GGCTCAATAG CCAAGCTCTG
GCGGATACTA TTTCCAGCCA TGAACCGGAG GTCGCCGGCA GTCATTTCAT CGGCCAATCC
GGCACCAATG CTGACGGCAC TCCCTCGGCG AAAGATGTCA CTAGCCTGGG AGATATTCGG
GGCCTCTCTC CAGAAGAGCC CACTAAACTG GGGGGTTATT ACTCGGCCAG CGTGGCTTAT
TTCGGTCATA TCAATGACCT CCATTCCGCC GATGGGGAAC AAAAAATGAG CACCTTTGCC
GTAGCCCTGG CCTCACCCTT GCCAAAAATC GAGATCCCAG TCAATGGCCA AATCATCACC
CTGGTTCCTT TTGCCAAGTC CGCGGGCACG ACCAACGGTT GTGCCGTAGA CGCTATCAGT
AGCGCCGCAG GAGACTTTCA ACCCACCAAT CAAATTGTGG ATTTCTATGC GGAGACAGTC
ACACCCACCT ATGGGAAATT CCGCATCAAC TACGAGGATG TGGAACAAGG AGCCGATCAT
GATATGGATG CCATCGTGGA ATATGAGTAT CAGGTCAATA ATGATGGGAC TGTGAGTATT
ACTCTAAATT CCACCTTTGC CTCCGGCTGT ATCATCCATC ATATGGGGTA CGTGATTTCA
GGCACCACCG CTGACGGTAC CTACCTAGAA GTCAGGGATA ATGATACCTC TGTCGGACAA
GATCCTGACT ATTTCCTAGA CACGCCCCCC GGCGCTAGCC CCGGCAACGG TTGGCAAGAC
GACGCGGCCC TACCTCTCAC CACCACCCGC ACCTTCACGC CAGGCACCGG CAGCGCCGCG
ACCTTATTAC GGGATCCCCT ATGGTATGCC GCCAAATGGG GCAGCTTTAA CGACCGCAAC
AAAGACAATA TCCCCCAAGG AACGGAATGG GACATTAATA ACGACGACAT TCCCGATAAT
TACTTTTCGG TTACCAACGC CCTGCAACTA GAAACACAAT TAACCAAAGC CTTCGAGGAA
ATTATTGAAG AAACTTCCTC CAATTCCTTA GTGGCCTTGA ATAGCGGCTC CATCAGCACC
AATAGTCATC TCTATCAAGC CCGCTTCAGC AGCGGCGCCT GGACAGGACA AGTGCTGGAT
TTCCCCATTA ATAGCGATGG CAGCCTGGGC GCCAAAAACT GGGAAGCGGC TGATTTACTA
GATGGTGTTT CGAGCAATAG CCGGAAAATC GTGACTTATA AACCCTCCAC GGGTAAGGGC
ATTCCCTTCC GCTGGCCCGC GGACCCTGAC TCCCCTGGAA GCACCGAACT TGATGTTTCC
CAGTCCACGG CCCTGAACGC CGATCCCGCC ACTGGCACCG CCGATGGTAG AGGAAGTGAA
CGCCTTGACT ACATCAGAGG CGATGAAATT TCCGGCTTTC GTGAGCGAAC GCGCAAGCTC
GGCGATATTG TCCATTCCTC CCCCGTGTAT GTGGGCCCCT CCCCGCAATA CCGTTATCCC
GATGACTGGA CAGACATAAA ACACAACGAA GATAGCCAAA ATGAGGATAG TAGCCCCTAT
TCAAGCTTCA AGAGCAACAC CAGCCGGGAC GCCATGGTCT ATGTAGGCGC CAATGACGGC
ATGCTCCACG CCTTCGATGC CGTAACCGGT CAGGAGCGCT TTGCCTATGT CCCCAACGCC
GTCATCAAAA ACCTTAACCG GCTAACCGAT CCCAATTACA ACCACCATTA TTATGTGGAT
GGAACTCCCA CGGTAGTAGA CGCCTTTTTC GGTAGCGACT GGCACACTTT ATTGGCGGGA
GGTCTGGGGG GCGGCGGCCA GGGAATTTTC GCCCTGAATA TCACTACCCC AGGCACCAGC
GAGAGCAGTA TTGCTTCCAA GGTGCTCTGG GAATTTACCG ATACCGATGA TCCCGACCTG
GGTTACACCT TCAGCGAGCC AAATATCGTA CGCATGCACA ACGGCAAATG GGCGGTCGTC
TTTGGCAATG GTTACAACAA TACCGAAAAT GACGGCAGCG CCAGCACCAC GGGCAATGCG
GTGCTTTTTA TCGTGGATGC GGAAACCGGC GCGCTGATCA AAAAAATCGA TACGGGAATA
GGCTCAGATG ACCCTGCTAG TGGAAATCGC CCCAATGGAC TGGCCACCGT AGCCCCTGTG
GATATAGATG GCGACTTTAT CGTCGATTAT ATCTATGGCG GGGATCTGTT AGGCAATCTG
TGGAAGTTCG ATGTCAAGGA AAGTCCAAAC AAGTGGAAGG TGGCCCATGG TCAACCACTT
TTCACCGCCA AGGCCGCCGA CAACAGTTAC CAACCCATCA CCACTCGTCC TCAAGTGGGG
CACCATCCCA CGGACCCCGG CTCTGTAATG GTTTACTTCG GCACGGGAAA ATATCTTGAG
ACCAACGACG ATAGCTCAAC GGGACAAACC ACCCAAACTT TTTATGGGAT TTGGGATAAA
AATGATGATA AAAAATTTAC TTCGTTTACC CGATCTAGCC TACTCCAGCA AGAGATCATC
AAGGAAGTTG TCCAGTCCTT TACTGATGAA GATGGTTCCG GCAACACCGG CTTTGAGCTT
CGGGTAACTA CGAAACACCC CATTGACTGG TCGACTCACG AGGGTTGGTA CATGGATTTA
GTGAACACTG AGAACGGCAA CACCAATAAC TATGGTGAAA AGCAGGTCAG CGATTCCGTG
CTGCGCAACA ATCGCATTAT TTTCACCACG CTGCTTCCCT CCGACGAGCT CTGCGACTTT
GGCGGCACGG GCTGGCTGAT GGAGTTGGAT GCGGCCAGCG GGGGCCATTT GTCCTTTGCG
CCTTTTGATC TCAATAATAA CGGGACGTTT ACGCGTGCCG ATTACATTAA TCTGGGCGAT
ACTGATGGCG ATGGCAATGA CGACTATGTG CCGCCCGGCG GCAAAAAATC GAAGGTGGGC
ATTATCAGCA CACCAGGTAT CATCTCTGGC CCTGGAACCA ATCCGGGATG GGAAGCCAAA
TATACCAGCG GCTCCACCGG CAATATTGAA GTCACGTCAG AAAATGCCGG GCCTGGTTAT
TTTGGCCGTA TGTCCTGGAT TCAACTGCGC TAA
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| Protein sequence | MMEKFRLNLP AYYAAAAALA LGYVGNTQGA NLNLNNKPLF LTDNAPPLTM LVMGKDHKLY
YEAYNDASDL DGDGTIEIGY KPARVDYYGY FDSHKCYVYS GNRFEPSTAA SDKTCSGAWS
GDFLNYLTTS RMDALRKVFY GGQRDIDTAS ETVLAGAFIP QDAHSWGKEY TSIAVDGYDL
NHYAPLTLPN AGKRHLFAVT SLADGNIPVL RVLQDKSERI WEWVSKEKPV ADDSLGTPDD
YSIRILACSS SLPEINCQQY GASSYKPTGL LQKYGENDSM YFGLLTGSYA KNTSGGVLRK
KVGSITDEID PGTGVFTTTN GIIKTIDNLR IIQFLYGKKP AYSPGWPEAW ITTRPMTEGE
QPNWGNPIAE MMYEGLRYFA GKASPTPAYS IGAGTSPDAD LGLPVATWDD PYASGNFPSC
SKPFQIVISD INPSYDTDQL PGSYFSSFTG DVSGLNSQAL ADTISSHEPE VAGSHFIGQS
GTNADGTPSA KDVTSLGDIR GLSPEEPTKL GGYYSASVAY FGHINDLHSA DGEQKMSTFA
VALASPLPKI EIPVNGQIIT LVPFAKSAGT TNGCAVDAIS SAAGDFQPTN QIVDFYAETV
TPTYGKFRIN YEDVEQGADH DMDAIVEYEY QVNNDGTVSI TLNSTFASGC IIHHMGYVIS
GTTADGTYLE VRDNDTSVGQ DPDYFLDTPP GASPGNGWQD DAALPLTTTR TFTPGTGSAA
TLLRDPLWYA AKWGSFNDRN KDNIPQGTEW DINNDDIPDN YFSVTNALQL ETQLTKAFEE
IIEETSSNSL VALNSGSIST NSHLYQARFS SGAWTGQVLD FPINSDGSLG AKNWEAADLL
DGVSSNSRKI VTYKPSTGKG IPFRWPADPD SPGSTELDVS QSTALNADPA TGTADGRGSE
RLDYIRGDEI SGFRERTRKL GDIVHSSPVY VGPSPQYRYP DDWTDIKHNE DSQNEDSSPY
SSFKSNTSRD AMVYVGANDG MLHAFDAVTG QERFAYVPNA VIKNLNRLTD PNYNHHYYVD
GTPTVVDAFF GSDWHTLLAG GLGGGGQGIF ALNITTPGTS ESSIASKVLW EFTDTDDPDL
GYTFSEPNIV RMHNGKWAVV FGNGYNNTEN DGSASTTGNA VLFIVDAETG ALIKKIDTGI
GSDDPASGNR PNGLATVAPV DIDGDFIVDY IYGGDLLGNL WKFDVKESPN KWKVAHGQPL
FTAKAADNSY QPITTRPQVG HHPTDPGSVM VYFGTGKYLE TNDDSSTGQT TQTFYGIWDK
NDDKKFTSFT RSSLLQQEII KEVVQSFTDE DGSGNTGFEL RVTTKHPIDW STHEGWYMDL
VNTENGNTNN YGEKQVSDSV LRNNRIIFTT LLPSDELCDF GGTGWLMELD AASGGHLSFA
PFDLNNNGTF TRADYINLGD TDGDGNDDYV PPGGKKSKVG IISTPGIISG PGTNPGWEAK
YTSGSTGNIE VTSENAGPGY FGRMSWIQLR
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