| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2272 |
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| Symbol | |
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| ID | 3705064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2618951 |
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| End bp | 2619979 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738751 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_344260 |
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| Protein GI | 77165735 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCC CATCTTACTA CTTACCTTCA AGCCGCGCGC AACGGGGTTT CTCACTAGTT
GAGATTTTAG CGGGGATGAC CGCGGGCTTG ATACTCACTA CGGGGGTTAT TCAAGTCTTT
TCCAGTAGCA AACAAAGCTA CCGGCTTCAG GAAGCGCTCT CCCGACTCCA GGAGAACGGC
CGCTTTGCCG TAGAGTTTAT CTCTTACGAG GCCCGCAATG CCGGCTACTT TGGCTGCGCT
GGAACCGAAA CCCGGGTAGT TAATACCCTC AATAATGCTG AACAATTTGC TTGGGATTTT
TCTACTCCCC TGCAAGGTTT TGAGGCCACC AGCGCCAGCA GCTGGACGCC TGCCCTAGAC
GCTACCATCA CCCAACCCCT TGGTAACCGG GATGTGTTGA CCTTCCGTCA TACTTCCGGC
AACCTGGCCA AAGTTGAACC GCCCTTCATG CCTACTACCT CCGCGGCGCT CCACATAACG
CCTGATAACG GGCTCAAGAA ATCCGATATT GTCATGGTTT CCGACTGTGT CGATGCAGCC
ATTCTTCAAG TAACCAATGC TAACCCAGAC ACCTCCGGCA CTTTAGTCCA TAACACCGGC
AACGGGGTCA CCCCCGGCAA CGCCACTAAA GATCTGGGAA AAAGATATAC CGACAAGGCT
AATATTATCC AAATCACCAC CAGCACCTAC TACATTCGCG CTAATCCGCG AGGCGTTCCC
TCCCTTTATA GGAAAGAGAG CGACGACAAC CCGCAAGAAC TCATCGAAGG CGTGGAGGAT
ATGCAAATTC TCTACGGCGA AGATACGGAT GGCAGCCAGG AGGCCAATGG TTATGTGACT
GCGGATAACG TGGCCAATTG GAATAATGTG GTCAGCCTAC GTCTCAATTT TCTGTTGCAA
ACCATGGAAA ATAATCTCGC CTCCTCTCCC CAATCCTATA CCTTTAATGG CGCCACCATA
ACTCCCAGCG ACAGGCGGCT GCGCCGGGTA TTCACCACAA CCCTGAATTT GAGGAATAGA
ACGTTATGA
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| Protein sequence | MKRPSYYLPS SRAQRGFSLV EILAGMTAGL ILTTGVIQVF SSSKQSYRLQ EALSRLQENG
RFAVEFISYE ARNAGYFGCA GTETRVVNTL NNAEQFAWDF STPLQGFEAT SASSWTPALD
ATITQPLGNR DVLTFRHTSG NLAKVEPPFM PTTSAALHIT PDNGLKKSDI VMVSDCVDAA
ILQVTNANPD TSGTLVHNTG NGVTPGNATK DLGKRYTDKA NIIQITTSTY YIRANPRGVP
SLYRKESDDN PQELIEGVED MQILYGEDTD GSQEANGYVT ADNVANWNNV VSLRLNFLLQ
TMENNLASSP QSYTFNGATI TPSDRRLRRV FTTTLNLRNR TL
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