| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2261 |
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| Symbol | |
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| ID | 3705423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2607062 |
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| End bp | 2608420 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738740 |
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| Product | Signal recognition particle protein |
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| Protein accession | YP_344249 |
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| Protein GI | 77165724 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.161738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ACTTGACGGA ACGTCTTGGC CACACGCTAA AACGGCTACG GGGCCAAGCG
CGCCTTACTC AGGATAATAT CAAAGATACC TTGCGTGAGG TGCGCGTTGC GTTGCTGGAG
GCGGATGTTG CGTTACCAGT GGTGCGGGAT TTTGTCGCAA AGGTTCGGGA GCGGGCGATT
GGCCAGGAGG TGTTGCGCAG TCTTACGCCA GGCCAGGCGT TTATTAAAAT CGTCCATGAA
GAGCTTATGG CGGTTATGGG AGAGGCTGCG GAAGGACTGA AGTTGGATGT CCGCCCTCCC
GCCGTAATCT TGATGGCGGG TTTACAGGGT TCTGGTAAAA CAACCACGGT AGCCAAACTC
GCCCGTTGGC TGAAGGAACA GCAAAAGAAG TCGGTGCTCG TGACTAGTGC CGATGTTTAC
CGACCAGCAG CGATTCAACA GCTTGAAACC CTCGCCAACG AGGTGGGGGT AGAGTTTTAC
CCAAGCAAGC CTACCGAAGA CCCGGTTGCT ATTGCCCAGG GGGCGATTCA GCAGGCCCGG
ACCCAAGTGT TGGATGTGCT TATTATTGAT ACTGCGGGTC GGTTGCATGT GGACGACTTG
ATGATGGCGG AGATCAAGCG CTTACATGAC GCAGTGAAGC CGGTTGAGAC CTTATTCGTG
GTGGATAGTA TGACCGGGCA GGATGCCGCG AATACGGCCC AGGCTTTTAA TGATTCTCTA
GCGCTGACGG GGGTTATTCT CACCAAGGTT GATGGCGATG CTCGCGGTGG GGCAGCCTTG
TCTATCCGCC AGATCACGGG TAAGCCTATC AAATTTTTAG GCGTTGGGGA GAAAACCGCC
GCCCTTGAAC TCTTTCATCC AGATCGCTTG GCTTCCCGCA TACTGGGTAT GGGCGATGTG
TTAAGCCTGG TGGAAGAGGT AGAGCAGAAG CTTGATAAAG ATAAGGCGGA GAAGCTTGCC
AAAAAGCTTA AGAAGGGAAA AGGTTTCAAT TTAGAAGATT TCCGTCAGCA GTTGCAGCAA
ATGAGCGAAA TGGGCGGAGT TTCGAACTTG CTTGATAAAT TACCGGGAAT CAACTTGCCT
GCGGGTGCGA CCGATCAGGT TAATGATCGG GAATTGATCC GTCTTGGGGC GATTATCAAT
TCCATGACTC CCCGTGAGCG CCAACGGCCG GAAATTATTA GAAGTTCTCG CAAACGGCGC
ATTGCGGCTG GGTCGGGCAC TCAGGTTCAG GAGGTCAACC GTTTACTTAA GCAGTTTGCC
CAGATGCAAA AGATGATGAA GCGGATGTCG CGCAAAGGAG GGATGGCTAA GCTGATGAGG
GGAATGAAAG GGGGGCTTCC GCCGGGGATG CCCTTCTGA
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| Protein sequence | MFDNLTERLG HTLKRLRGQA RLTQDNIKDT LREVRVALLE ADVALPVVRD FVAKVRERAI
GQEVLRSLTP GQAFIKIVHE ELMAVMGEAA EGLKLDVRPP AVILMAGLQG SGKTTTVAKL
ARWLKEQQKK SVLVTSADVY RPAAIQQLET LANEVGVEFY PSKPTEDPVA IAQGAIQQAR
TQVLDVLIID TAGRLHVDDL MMAEIKRLHD AVKPVETLFV VDSMTGQDAA NTAQAFNDSL
ALTGVILTKV DGDARGGAAL SIRQITGKPI KFLGVGEKTA ALELFHPDRL ASRILGMGDV
LSLVEEVEQK LDKDKAEKLA KKLKKGKGFN LEDFRQQLQQ MSEMGGVSNL LDKLPGINLP
AGATDQVNDR ELIRLGAIIN SMTPRERQRP EIIRSSRKRR IAAGSGTQVQ EVNRLLKQFA
QMQKMMKRMS RKGGMAKLMR GMKGGLPPGM PF
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