Gene Noc_2223 details

Gene Information

• Locus tag: Noc_2223
• ID: 3705103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 2568096
• End bp: 2568740
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637738699
• Product: hypothetical protein
• Protein accession: YP_344213
• Protein GI: 77165688
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1030] Membrane-bound serine protease (ClpP class)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAGGC ACGTTCGGGT AATATGGAAT ACTGCCTTCA TAGGTGCAAT ATGCGGTAGC 
CTATTATGGC TTAGGCGGGA AGATATTCCC GCCCACCTCG ATGCCCTCGT TCTCGGTATT 
TTGGTGGGGA CCCTTTACGG CGGGCTTTAT TGGCGATATT TATTCCATCG CATTACCCGT 
AAAGAGCGGC GCTTTGAACG GAACCGAATT TTGGTACATT ATTTATCTCT ATTTGAGCTG 
CTATTAACGG CTGCAACTTG GAGTCTCTAT CTTTTAATCG CTCTAACTCT TTTGATATTG 
GCGGCTGTTC TCCTAGATAT TTTCTCCGGC TATTGGTGGA GTATTCTAAT CAGCAGTTTT 
GGCATGGCGG CAGCTCTGAG CTTGGGAGGC AGTATTGTTC GCTACGAACG GCTTTATGGG 
GCGCTCTATT ACCAATACGA CAGCCGCTCT TGGCTCGGAG GAGAAGGGCT GCTTTATCAA 
GAGGGAAGAG CAATCCAACC ACTCACTCCC AAAGGCAAGA TTATAATCAA TGGAGAGTTA 
TGGCACGCCG TCTCTCTGAA TGGCGACAAT ATCGAAGCGG GAAAGAAGGT AGAGGTGATT 
TCCCGCGAGG GTCTGACGCT TTATGTGGAC AGCCTTCCCC AATAG 

 

Protein sequence

MVRHVRVIWN TAFIGAICGS LLWLRREDIP AHLDALVLGI LVGTLYGGLY WRYLFHRITR 
KERRFERNRI LVHYLSLFEL LLTAATWSLY LLIALTLLIL AAVLLDIFSG YWWSILISSF 
GMAAALSLGG SIVRYERLYG ALYYQYDSRS WLGGEGLLYQ EGRAIQPLTP KGKIIINGEL 
WHAVSLNGDN IEAGKKVEVI SREGLTLYVD SLPQ