| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2213 |
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| Symbol | |
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| ID | 3705151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2556356 |
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| End bp | 2557579 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637738689 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_344203 |
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| Protein GI | 77165678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGAGT TGGAAAAACT AAAAATTCAT CGCACCCCCT TAAAAAAATC TTCTCCAGCC
ACCCAATCTC GCCGCAAGGG GTGGTTTCTG TTTATCGCTC TAGTCGCCGG GATGGCGGTT
ATTTATTTAG CGTTTACCGG CGCCTTTAAC CCAAGGGTGG AGGTGGCCGT GGGAACGGTA
TCGCTCAGCT ATCCCGCCCA GGAATATACC CTGTTCAATG CTACGGGCTA TGTGGTTCCC
CAAACCAAGG CCGATATCGC CTCCAAGGCT ACGGGCCGGT TAGAAGTCCT AGAAGTAGAG
GAAGGGAATC ACGTGGAAAA AGGCGATATC ATTGCCCGCT TGGAAAACCA GGATGTCCTG
GCAAGCAAGG AACGGGCTGA AGCCAATGTC GCCGTGGCCC GTGCTGGGCT CCTGGAGGCC
CAGGCCGAGC TTAAAGACGC CAGGCTTGCC TTGAAACGAG CCAAGTCCCT GATCGATAAA
AAATTTATTA CCCACGAGAC TTACGATGCC GCCGTAGCTC GTCATGATAA GGCCGCCGCC
GCGGTCCAAA GCGCCAAGGC CAACATTCTA GCGGCCCAGG CAAGCTACCA AGAAGCCAAG
GTGGCGGTGG AATACACTTT TATCCGCGCC CCTTTTGATG GCGTTATCCT GGAAAAATAT
GCCGATCTCG GGGATGTAGT GGCGCCCTTC TCCTCCACCA TCGAATCCAA AGGAGCCGTA
GCCTCCATGG CGGACATGCG CACCCTGCAA GTGGAAGCCG ACGTCTCAGA ATCAAACTTG
ATGCAGGTCA AAGTCAATCA ACCCTGCGAA ATTCAACTCG ACGCCCTGCC AGGGGAGCGC
TTCCGGGGCC GGGTTCACAT GATTGTCCCA ACCGTGGATC GCACCAAGGC GACTATCTTA
GTCAAGGTTA GCTTTGTCGA TCTGGATGAG CGTATTCTGC CAGACATGAG CGCCCGGGTC
GCCTTTCTCT CAAAGGCATT GTCCCCCCAG GAACAAAAAC CCTATACCGT GGCGCCAAGC
TCCGCCATTA TTAGGCAGGA AGAGCAAGTT TATGCCTTCC GTGTTGATGG GAACCAAGCC
CATAAAATAC CACTCACAGT GGGCAAACGA TTGGATGGGC AGAGAGTGGT AAAAAAGGGC
CTCCAACAAG GCGATAAGGT CATTCTCAAT CCGCCGGATG ATCTGCCCGA AGGCGCCCAG
GTGACAGCCA AGGAAGATAG CTAG
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| Protein sequence | MEELEKLKIH RTPLKKSSPA TQSRRKGWFL FIALVAGMAV IYLAFTGAFN PRVEVAVGTV
SLSYPAQEYT LFNATGYVVP QTKADIASKA TGRLEVLEVE EGNHVEKGDI IARLENQDVL
ASKERAEANV AVARAGLLEA QAELKDARLA LKRAKSLIDK KFITHETYDA AVARHDKAAA
AVQSAKANIL AAQASYQEAK VAVEYTFIRA PFDGVILEKY ADLGDVVAPF SSTIESKGAV
ASMADMRTLQ VEADVSESNL MQVKVNQPCE IQLDALPGER FRGRVHMIVP TVDRTKATIL
VKVSFVDLDE RILPDMSARV AFLSKALSPQ EQKPYTVAPS SAIIRQEEQV YAFRVDGNQA
HKIPLTVGKR LDGQRVVKKG LQQGDKVILN PPDDLPEGAQ VTAKEDS
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