| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2201 |
|---|
| Symbol | |
|---|
| ID | 3705139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2544640 |
|---|
| End bp | 2546529 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637738677 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_344191 |
|---|
| Protein GI | 77165666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCC ACCTGGGTTT ATTTTGTCTT CTTTATGGTA TGTGCGGCTG GGCCCAGGCG
GAGATTCCCA CCCTGGAGGA ACTGCTGGCG GCAGCCCAGC AACAGCAGCT TTCGGAACGC
CCCGCGTGGT GGGCCTTGCT TCATTACCGG CCGACCGTGC TGGGATGGAC TCACAAAAGC
CAAGCGGACG ATCCCCGTTT TTTTCTTGCC AAAAACGGGA AAACCGATCC CCATGGGGAG
CTTACGGCAA CGCTCATAGC GTTGCGCAAT GGGGATGGCC AGGGGACTCA TCCCCAATGC
CGCTTTCCTG CTCGCTTTTA TTGGCTACAA CAACAGGGCC ATCCTTTCTC CCGTATTCCG
GCGGTGCCAT GCCCACAGCT TGCAAGTTGG TTGGAGCAAT TGAATACGGC CCGGGTTACC
CTGGTATTTG CCTCCTCCTA TCTCAATAGC CCATCCTCCA TGTTTGGCCA TACCTTTTTG
AGGTTAGATC CGCCCAGCTT CAATCAGGAC AGCCTGATTT TAGCCAGCAC GGTCAGCTAT
GCCGCAGATG CCGCGGCCCA TGACAGCGAA ATCATGTTTG CTTACCGGGG TATTTTTGGG
GGTTATCCGG GAATCACCAC GGTAGAGCCT TATTTCGACA AGCTTCGCCT CTATAGCAAA
CTGGAAAACC GGGATCTGTG GGAGTACGCG TTGAATCTGC GTCCTGATGA GGTGACCCAG
TTACTTCGCC ATGTCTGGGA AATAAAAGAT AAGCGGTTTG ATTATTTTTT CTTTGACGAA
AACTGTGCCT ATCGTCTGCT GGCCCTGATT GATGTAGCCC GTCCTGGCAC CAGGCTGATT
CCCCAAGTGA GCATTTTGCG GGCTATTCCT TCCGATACGG TGCGTATTGT GGTCGCCAAT
CATTTGGTCG ATTCAGTTTA TTTTCGCCCC TCCCAGGCGA CCGAGTTACG CCACCATTTA
AGCCAACTCA AGGCTTCCGA GCGCCACTGG GTATTTTCAA TGAATGAAAG CCAACAGCTT
CCTTCTGAGA AAGCCACTGC CGGCTTAGCG CCGGAGCGGT ATGCGGCGGT TCTGGAAACA
GCCTATGAGC TGGTGCGCTA TCGGGTCCAA AAGGAGCAAT TATCCCGCGA GGCTACCGCC
GATTTGTCCT ATGGATTGCT GCAAGCGCGC AGCAAGATAC CGGGATCATC CCCTTTATCG
GCTGCGCCCC GGCCCAAGGT GCGGGATGAT CAAGGCCATC CGACCGGCCG CATAACGGCT
ATGGCGGGCC GCCAAGGGCA ACGTCCTTAT CTGGGGTTAT CGCTGCGGCC CGCCTACCAT
GATTTTTCGG ACCCAGCGCC GGGTTACCGG CTTGGCTCCC AGCTTCAGTT TCTAAATGCG
GAGCTGCGTT ATTATTGGGA GAGCAATCAG TTTGAGCTTG AGCAGCTAAA TCTCGTGGAT
ATTATTTCCT TGTCTGCCCG GGATCGCTTC TTCCGTCCCA TTTCATGGCA AGCGGGTTTT
GGCGCGGATC GCCAGTTGAC CAGTGAAGGG ACGCGCCCCT TGGCCGCTTA TCTTAAAGGC
GGTGCGGGGG TGAGTTACGG TATTGCCCAT GGATTGGCCT ATGCTTTAGC TACCGGTACC
GGCCGGATAG GCACTCAGCT CCAGGATAGT TATCAGCTAT CGCCGGGCAT CGCCCTGGGC
TGGAATTTAC AACGGTACTG GGGAAGTTTT CGGGTCGAAG CTCAGAGTCA ATTTTTCCCA
GGCCAGAATG AAGATCCCTA TTATCGGGGT AGCGCCAGTC TGAATTTATA TTGGCCGCCC
GGCTGGGGGC TGACTTTCAA TATAGGACGG GAGAAGAGCG GGGATTTTTA TGCCATTATC
CTCCAAGGCG GCGTTCGGCT TTATTTTTAA
|
|---|
| Protein sequence | MLRHLGLFCL LYGMCGWAQA EIPTLEELLA AAQQQQLSER PAWWALLHYR PTVLGWTHKS
QADDPRFFLA KNGKTDPHGE LTATLIALRN GDGQGTHPQC RFPARFYWLQ QQGHPFSRIP
AVPCPQLASW LEQLNTARVT LVFASSYLNS PSSMFGHTFL RLDPPSFNQD SLILASTVSY
AADAAAHDSE IMFAYRGIFG GYPGITTVEP YFDKLRLYSK LENRDLWEYA LNLRPDEVTQ
LLRHVWEIKD KRFDYFFFDE NCAYRLLALI DVARPGTRLI PQVSILRAIP SDTVRIVVAN
HLVDSVYFRP SQATELRHHL SQLKASERHW VFSMNESQQL PSEKATAGLA PERYAAVLET
AYELVRYRVQ KEQLSREATA DLSYGLLQAR SKIPGSSPLS AAPRPKVRDD QGHPTGRITA
MAGRQGQRPY LGLSLRPAYH DFSDPAPGYR LGSQLQFLNA ELRYYWESNQ FELEQLNLVD
IISLSARDRF FRPISWQAGF GADRQLTSEG TRPLAAYLKG GAGVSYGIAH GLAYALATGT
GRIGTQLQDS YQLSPGIALG WNLQRYWGSF RVEAQSQFFP GQNEDPYYRG SASLNLYWPP
GWGLTFNIGR EKSGDFYAII LQGGVRLYF
|
|---|
| |