| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2194 |
|---|
| Symbol | |
|---|
| ID | 3705230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2536269 |
|---|
| End bp | 2537993 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637738670 |
|---|
| Product | potassium efflux system protein |
|---|
| Protein accession | YP_344184 |
|---|
| Protein GI | 77165659 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACG GCTTTGACTT CACCCCGGTG CTGATTTTCC TGACGGCCGC GGTGGCACTG
GTACCCCTGT TTCAAGCCTT GGGGGTCAGT CCCATCCTCG CCTATTTAGC CGCTGGCGCC
ATCATCGGCC CCCATGTCCT GGGGTTAATC AAGGAAGTGG AAAACATCGG CCATGTGGCA
GAATTTGGAG TCATTTTTCT CTTGTTTACC ATTGGCCTGG AATTATCCAT TCTCCGGTTA
ATGAACATGC GCAGGGAGGT GCTGGGCCTG GGCACCGTTC AGGTATTGGT AACCGCCTTG
CTTATCGGCT ATGGAGCTCA CCAGCTAGGC AGTTCCATAG AAGTGGCGAT TCTGATTGGT
GGCGGCTTGG CCTTTTCCTC CACCGCCATG GTAATGCAGC TACTGGCCGA GCGGGGCGAA
AGCGCCGGCC GTACCGGCCG TGGCGCCTTT TCCGTGCTGT TGTTTCAAGA CTTAGCGGTG
GTGCCTTTTA TGGCTCTATT GCCCCTCTTG GCAAGTGATG GCAGCGATAT TGGGACAGCC
TTGGCACTGG CGGGAGCCAA GGCGATACTC GCCCTTCTGG TCATTTTTTT CATTGGCCGT
TTCCTGCTCA GCCCCCTCTA TGACCTGGTG GCCCGCACCC ATAATCGTGA ACTCTTCGTC
GCTACCACCT TGCTTATCGT ATTGGGCACC AGTTGGACCA CTGGCCGCAT GGGATTGTCA
CTGGAACTAG GCGCTTTCCT GGCGGGCCTG CTGCTGGCCG AAACCCAATA CCGCCATCAG
GTGGAGGGCG ACATCAAACC TTTTAAAGGG TTATTCCTGG GACTTTTTTT TATGTCAGTG
GGGATGGCAA TTGACTTGCA ACTAGTATGG ACCCAAATTG GTACGGTGCT GCTACTGCTG
GCTAGTCTGT TAAGCCTGAA ATGCGCGGTA CTTGTCCTGT TCTGCCGGCT GTTTGGCTTT
CCCATGGCCA CTGCCGTTCA TATTGGGTTA TTGCTAGCCC AAGGCGGCGA GTTTGCTTTC
GTGCTCTTTG GCTTCGCCAT GATTCTAGGG ATTATCCCCA CGGAAATCGG CCAGCTTCTA
TTAGTCACTG TCAGCCTTAG CATGGTGCTG ACTCCCTGGT TGGCAAGCCT GGGTGCCTAC
CTCTCCCGCC GGCTGACTCC GCCTCTGGCT AATCAAGAGG AGCGCATTCA AACCGCTAGC
GAGGACTTGC GTAATCATGT CATTGTGGGA GGGTTTGGAC GGGTAGGACA AACAGTAGCC
CGGCTGCTGC AAAACTATAA TGTGCCCTAT ATTGCTCTTG ATGTGGACCC CCTTAAAGTC
GCCCAGGGGC AAGCACAGGG CTATAGCGTC TATTATGGCA GCGCCGCCCA GATTGATGTG
CTCAAAGCGG CAGGTTTGGA ATGGGCCCGT TTGCTGGTGA TGACCCTGGA TCGCCATCCG
GAAAGGACTC ACTATTTAAT CGGCGACCTG CACCGTTCCT ATCCTGATTT GGAAATTCTG
GTGCGGGGAC GGGATCAAAT CCAGAGCAAG CAACTGCGCC AAGCCGGCGC CGCCGCGGTG
ATTCCCGAAG CCCTGGAAGC CAGTTTGCAG CTTTCTAGCC TGACCTTAAA ATGCTGGGGG
ATTCCGCCGG AAGCCGTGGA ACAGGCTTTA GAGGAAATAC GCCGCGAGGA CTATGCTCCC
ATCGTGGCCT TGCTCGCCAA ACGGCGAAAA ACAACGGATA AATGA
|
|---|
| Protein sequence | MEHGFDFTPV LIFLTAAVAL VPLFQALGVS PILAYLAAGA IIGPHVLGLI KEVENIGHVA
EFGVIFLLFT IGLELSILRL MNMRREVLGL GTVQVLVTAL LIGYGAHQLG SSIEVAILIG
GGLAFSSTAM VMQLLAERGE SAGRTGRGAF SVLLFQDLAV VPFMALLPLL ASDGSDIGTA
LALAGAKAIL ALLVIFFIGR FLLSPLYDLV ARTHNRELFV ATTLLIVLGT SWTTGRMGLS
LELGAFLAGL LLAETQYRHQ VEGDIKPFKG LFLGLFFMSV GMAIDLQLVW TQIGTVLLLL
ASLLSLKCAV LVLFCRLFGF PMATAVHIGL LLAQGGEFAF VLFGFAMILG IIPTEIGQLL
LVTVSLSMVL TPWLASLGAY LSRRLTPPLA NQEERIQTAS EDLRNHVIVG GFGRVGQTVA
RLLQNYNVPY IALDVDPLKV AQGQAQGYSV YYGSAAQIDV LKAAGLEWAR LLVMTLDRHP
ERTHYLIGDL HRSYPDLEIL VRGRDQIQSK QLRQAGAAAV IPEALEASLQ LSSLTLKCWG
IPPEAVEQAL EEIRREDYAP IVALLAKRRK TTDK
|
|---|
| |