| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2182 |
|---|
| Symbol | |
|---|
| ID | 3705218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2522248 |
|---|
| End bp | 2523027 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637738658 |
|---|
| Product | ABC polysaccharide/polyol phosphate export systems, inner membrane subunit |
|---|
| Protein accession | YP_344172 |
|---|
| Protein GI | 77165647 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.718271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATAT GGCGACATCG TGCCCTTTTC CGGCGTTTTC TGGCGCGGGA AATTAAAAGC
CGGTATCTTG GCAGTATCAG CGGTTATTTC TGGGTTCTGG TTCAGCCGCT GGCCCAGCTC
GCTTTGTATT CTCTGGTTTT TACCACTATT TTTAAGGTTC GCTTTCCGGA GCTCGAGCAG
CACAGTTTTG TGGAGTTTGT CGCCATTGCC CTATGGCCTT GGGTCGCCTT TCATGAGGGG
GTTATGCGGG CAACGACGGC TATCACTAAT AATGCGGGGC TGATTAGAAA AATTGCCTTG
CCCTATGAGT TGCTGGTGTA TGCGGCGGTG GGCGGCAGCT ACATCGTCCA TGGAGTAGGT
TTTTTATTAG TGTTAGGGGT GCTCACGATG CTTAGTGCCG AGTTGTTTCT GAATACTTTG
CCGCTGGTGT TGTGGTTGTG GGGGCTACTC TTGCTACTGA CCCTGGGGAT AGCACTAATT
CTGTCCGCGC TGCAAGTTTT TTTGAAGGAT ATTGAGCATT TGCTTGCCCC GGTGTTCATG
CTTTTATTTT ACGCTTCGCC GATTTTATAT CCCCTCTCAT TAGTGCCGGA GCCTTTCCGC
ACCTTGATTC TGGCCAATCC CTTGAGCTAT TTTCTCGACC GTTTACGGGC CTTGCTGATG
TTTGGGGAGT GGGTTCCCAG CGGAGCCGAT GTTCTGGCAT TGCTGGGCAG CGGGTTGCTC
TTTATAGTGG GGTTACGATT ATTCCGGCGT TGTGCCGGTC GGTTCGAGGA ATTTTTATAG
|
|---|
| Protein sequence | MLIWRHRALF RRFLAREIKS RYLGSISGYF WVLVQPLAQL ALYSLVFTTI FKVRFPELEQ
HSFVEFVAIA LWPWVAFHEG VMRATTAITN NAGLIRKIAL PYELLVYAAV GGSYIVHGVG
FLLVLGVLTM LSAELFLNTL PLVLWLWGLL LLLTLGIALI LSALQVFLKD IEHLLAPVFM
LLFYASPILY PLSLVPEPFR TLILANPLSY FLDRLRALLM FGEWVPSGAD VLALLGSGLL
FIVGLRLFRR CAGRFEEFL
|
|---|
| |