Gene Noc_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2157 
SymbolflhF 
ID3704831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2491438 
End bp2492619 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content52% 
IMG OID637738633 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_344147 
Protein GI77165622 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA GGCGGTTTAC AGCTCCGGAT GTGCGTCAAG CTATCCGGCA GGTACGGGAG 
GCAATGGGGG CGGATGCCGT TATCTTGTCC AACCGTTCGG TTGGAGAGGG TGTGGAGATC
GTCGCTGCCA CGGATTATGA AGATACTACG CCTAAGCAAG TTCTGAATTC TCAGCGCCGT
GATGGGGCGG AGCCTCTGCC AGAGAAAAGA ACCTCTTTTG CGGATCAGAG AGGTGGGTCT
CAGGAGCCAA TCCTCCTTGA GATGCACCAA GAGATGAAAA ATTTACGCAA TCTAGTAGAA
ACACAATTAT CAGATCTCGC ATGGGGTGAA ATAGGACGCC GTAACCCCTC TAAGGCGCAA
CTGCTCCGCC GATTAATGGG TTTGGATCTA GCCTCCGATC TTTGCCAGCA GTTGGCTGCT
CAGGTGAATA ATGAAGGTGC TCCTCATCAA ATTTGGCAGC AGGCATTGAA GGGATTGACT
GACCTCATTC CTATTGCTAA CGATGATATT TTGTCCGATG GCGGCATCAT CGCCCTTGTA
GGTCCGACGG GTGTGGGAAA AACTACCAGC GTGGCCAAGC TCGCGGCGCG CTTTGCCCTT
TGCCATGGCC TCCATAGTGT TGCTCTGGTG ACCACTGATT GTTTCCGCAT CGGCGCCCAG
GAGCAGTTGC ATACCTATGG CCGCATTCTG GGTATTCCAG TCAAGGTGGC CCGTGATCAG
CAGACATTAC AGGAAACCCT GGAATATTTG GCGGATCGGC GATTAGTACT TATTGACACG
GCAGGTATGA GCCAGCGGGA TATGCATCTT ACCGAGCAAT TTACCATGCT TGCAGAGGGT
ACCCTAGAAA TCAGGAACTA CTTAGTGCTC TCCGCCGCTA CCCAATTCTC GGTGTTAGAT
GAAGTAGTAC GGAAATTCAA CCGGATAGAT CTTGCCGGCT GTATCCTTAC CAAACTTGAC
GAGGCGGCCA GCCTCGGCGG AATGGTGTCC GCTGCTATTC GTCATCATTT ACCTTTAGCC
TATGTCTGCG ATGGACAACG GGTACCGGAG GATTTTTCTC CAGCCCGCGC CCAGAACATC
GTCCATTTGC TCAGCGAATA TGCCCATGAG CAGGAGAAAG GATTAACGGA TGAGGTCTTA
GCTCAAACTT TCGGAAGGGG TGGCGCTTAT GCTCATGTCT GA
 
Protein sequence
MKIRRFTAPD VRQAIRQVRE AMGADAVILS NRSVGEGVEI VAATDYEDTT PKQVLNSQRR 
DGAEPLPEKR TSFADQRGGS QEPILLEMHQ EMKNLRNLVE TQLSDLAWGE IGRRNPSKAQ
LLRRLMGLDL ASDLCQQLAA QVNNEGAPHQ IWQQALKGLT DLIPIANDDI LSDGGIIALV
GPTGVGKTTS VAKLAARFAL CHGLHSVALV TTDCFRIGAQ EQLHTYGRIL GIPVKVARDQ
QTLQETLEYL ADRRLVLIDT AGMSQRDMHL TEQFTMLAEG TLEIRNYLVL SAATQFSVLD
EVVRKFNRID LAGCILTKLD EAASLGGMVS AAIRHHLPLA YVCDGQRVPE DFSPARAQNI
VHLLSEYAHE QEKGLTDEVL AQTFGRGGAY AHV