| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2151 |
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| Symbol | |
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| ID | 3705343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2482803 |
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| End bp | 2486279 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738627 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_344141 |
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| Protein GI | 77165616 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATG ATAAGGATGT TCTTTTTGTC TTAAGGTTAT TTTTGGCGCT TATTTTTTTT
ATCCCTCCTG CTTTGTGGGC AGAGCTCTCT TCAGTAACGT CGCCGGATGG ATTAAATTCC
TTCATAGCCT TAGAGCAAGT CCGTAATAAA ATGAGAGAGT TAGAAGAGGT TCAAGGATTA
GATGAGGCAC AAAAGAAAAA ACTGCTGGAT TTATATCAGC TAACTAAAGA GCGTTTGCAA
ACAGCTCAAG GCTATGGGGA CAAGGCTAGG GTCTATCGAC AGGCTATAGA AGCGGCGCCG
GCCAAAATAG AAGAAATTAA TAGGCATCTC GCTTCTCCAG GCATCGATAA GGCAATGGCA
GCCTTGGAGC AGATCCCCGG GGAAACCCCT CTCTCCGAAT TGGAACAGCA GCTAGCAGCC
GAGCAGGCTG GCCTCGCTAC CCTAGAAAGT TCCCTCGCTG GGTTAGAGAA GCAATGGCAA
GAGCAGCAAT CTCGACCCCG ACAGGCCCGG GATCAGCTCA CGGAAGCCAA GCAGCAGCAG
GAACGTATAG AAAATGATCT TAAAGCATTA CCGCCGGGGG AAACGTCCCT CATTTCCGAA
GCCCGTCAGC TAGCCTTGCA GGCACGGCTA GAAGTATACC TCAATGAAAT TAACATGCTT
GATCAGGAAC TATCAAGTCA TAATGTCCGG TTACAGGCGC TGAAGGCACA ACGGGATCTG
ACAGCACAGC AGGTTTGGCA AACCCAGGCG CGGGTTAAGT TTCTTGAAGC ATTAATTAGG
CAGCGGCGGC GAGAGGAAGT AGGACAGGCC CAAGAAGCAG CTGCCCGGGC AGAATGGGAA
GCTGCTGGTA AACATCCTGC CATTCAGGAG CTGGCTGCAC AGAATGCCCG CCTCAGCAAA
GAGTTTGCTA CGTTGGCCAC GCGCTTGAGC CGCATTACTG CTGAACATGA AGCCGCAGAA
GCTCACTTAA AGCAAATGGA ACAGGACTTT AAAAATGCGC GGCAGAGTTT AGAAATCGCT
GGGTTGAATA AAGCGTTACA GCAGTTTTTA CAGGACCAAC GCCGCAGTTT ACCAGACCTT
AGCCATTACC AAGAGGAAAC CGAACAGCAC CGGGTGGAGA TGGCTGAAGT TGGCCTCAGC
CAACTTCGAG TGGATGGACA GCGCCGCCAG CTCAACAAGC TTGAGGATGC GGTCACCCAG
GTCATAGCGG AACAAGTGGG GCCGGGTTTA GCGCCTTCCC CGCGAGAAGA AATTAAGGTA
GAGGTGCGTA ATCTACTGAA AGGCAGGCAA ATTTTATTAG ATAAACTTAG CGCTATTCAA
AGCCAATACT TGCGCTCGGT AGGAAATTTG GAGTTTATAC AGCAGCAGCT CATGGAGAGG
GCCAGGCAAT ATGCGGTATT CCTCGATGAA CATCTACTAT GGATTCCTAG CGCTGCTCCT
TTAGATTTCC AAACCGGACA GGATTTGCTG GCGGGAATGG TCTGGCTGTT ATCTCTGGAG
AGTTGGCAGG ATACCGCCCG AGCATTGGGT TCTATCGCGA TGGAGGAGCC CCTGTTAATT
ATCGTGGTGA TATTGATCTT TATTGGGTTA CTTCAGGTGC GTTATAACCT AGGCGGGACT
TTAAAGACGA CCACAGAGCG GATAACCATG CCCTATGCAG ATCGTTTCAG CTTTACTCTC
CGAGCCTTCA TAGTCACGCT GCTGGCTGCG GCGCCTTGGC CCCTGTTGGT AGGTTTTATA
GGATGGCTTT TGCGAGTTTC TCCGGAAGTT CCAGGCTTTG CTAAAGCGGT AGGCGCCGGC
TTGACTGCTA TCTCCTTACC CCTGTTTTTA ATGCATGGAT TTCGCCTCTT GTGCCGCAGC
CATGGGGTCG CCATTGATCA TTTTGGTTGG CAGCAGCAAA CTGTGACACT CTGGCGGAAA
AATCTCACTT GGGTGATTCC GGTGATGTTG CCGGCCTTGT TCGTGGCAAC AGTGGCGGGT
GCCGAAGCGA ATGAGATTTA CGCCGAAAGC CTTGGTCGGG TAGGGCTATT AGTGAGCATG
GTGGCGCTCG CGGTATTTTT TCAACGGATA TTAAGACCTA AAGGGGGGAT TGCCGAACGG
TATTTAGACG AGCAACCGAG AAGCTGGCTG TCCCGTTTCC GTTATGTGTG GTATCCGGCT
ATTGTTTTCC TTCCTATCTC TTTAGCGGGC TTGGCGATGG TAGGGTATTT CTATACGGCG
CTCCATCTTA AAAATGAGAT TGTTGTTACC TTATATCTGA TTATCGCCGC AGCGCTGGTT
CATGATTTAG CTATCCGCTG GCTTGAGGTG ACGCAGCGCA AGCTGGCCTT GCTTAAAATG
CGGGAGAGGC GGGAGATTGA ACGAGTGACC CAATCTACCA GAGAGGCGGC GGGCCGGTCT
GGCGCGGGAA TCCCCACTAA ACTAGATATT TACCAGGTGG ATATTCAAAC GGTTGATTCG
CAAACCCGCC AGCTACTCCG GACGGTGGTG GGTTTGTCCA TTATTGTTGG CTTTTGGCTT
ATTTGGGCAC CGACTTTTCC CGCGTTAGGT ATCCTTAATG ACATTACCTT ATGGCATCAT
ACCGCAGTCG TGGAAGGTCA AGAGGTGCAA AAACCTTTTA CCCTTGCTAA CTTAGCGCTA
GCCCTGGTTT TGGCCCTGGT GGCCTTTGGC GCGGCCAGAA ACCTTCCCGG TGTTTTAGAA
ATAGTGGTGC TGCGCCGGCT TTCCTTAGTG CCTGGTAGTC GTTATGCCAT TACGACGTTA
TTGCGCTATG CCATTGGGAG TGCCGGTATT GTCTTGGTAT TTGATGCTAT TGGGGGCAGT
TGGTCCCAGA TACAGTGGTT GGTGGCTGCT CTCACCGTGG GATTAGGGTT TGGATTGCAG
GAAATTTTTG CCAATTTTGT TTCGGGCCTG ATCATTTTAT TTGAACGGCC CATTCGGGTT
GGTGATGTGG TGACGGTAGG TGATATCTCG GGCACGGTTT CTCGGATTCG AATCCGCGCT
ACTACGGTAA CGGACTTTGA TCGTAAGGAA CTGATTGTTC CTAATAAGTC TTTTGTGACA
GATAGATTAG TGAACTGGAC TCTTTCTGAT CCTATCACTC GGATCACGTT GAAGATGGGG
GTGGCTTATG GATCGGATAC TACCCTCACG CATCAGATCA TTCTGGGGGT TGTCAACGCT
AATCCCTTAG TATTGGAGGA TCCTCCTCCT AGCGTTTATT TTGTGGGCTT TGGGGAAGGC
ACCTTGGACT TTATTGTTTG GGCCTTTGTG CGGGAGCTAG GAAATCGCTA TCCCTTAATG
CATGAGCTGA ATACGGCCAT CAATCGGGCC CTGGGTGAAC AGGGGATTGA AATACCGTTT
CCCCAACGAG ACATTCATGT CCGTTCGGTC AATATGCCGG CACTGAACGG GTTAGGTTCC
CAGAGAGCGC CGGAGGCGGA TTGCCCGCCC TCACAACAGG AGGACTCCGT CACCTAG
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| Protein sequence | MLNDKDVLFV LRLFLALIFF IPPALWAELS SVTSPDGLNS FIALEQVRNK MRELEEVQGL
DEAQKKKLLD LYQLTKERLQ TAQGYGDKAR VYRQAIEAAP AKIEEINRHL ASPGIDKAMA
ALEQIPGETP LSELEQQLAA EQAGLATLES SLAGLEKQWQ EQQSRPRQAR DQLTEAKQQQ
ERIENDLKAL PPGETSLISE ARQLALQARL EVYLNEINML DQELSSHNVR LQALKAQRDL
TAQQVWQTQA RVKFLEALIR QRRREEVGQA QEAAARAEWE AAGKHPAIQE LAAQNARLSK
EFATLATRLS RITAEHEAAE AHLKQMEQDF KNARQSLEIA GLNKALQQFL QDQRRSLPDL
SHYQEETEQH RVEMAEVGLS QLRVDGQRRQ LNKLEDAVTQ VIAEQVGPGL APSPREEIKV
EVRNLLKGRQ ILLDKLSAIQ SQYLRSVGNL EFIQQQLMER ARQYAVFLDE HLLWIPSAAP
LDFQTGQDLL AGMVWLLSLE SWQDTARALG SIAMEEPLLI IVVILIFIGL LQVRYNLGGT
LKTTTERITM PYADRFSFTL RAFIVTLLAA APWPLLVGFI GWLLRVSPEV PGFAKAVGAG
LTAISLPLFL MHGFRLLCRS HGVAIDHFGW QQQTVTLWRK NLTWVIPVML PALFVATVAG
AEANEIYAES LGRVGLLVSM VALAVFFQRI LRPKGGIAER YLDEQPRSWL SRFRYVWYPA
IVFLPISLAG LAMVGYFYTA LHLKNEIVVT LYLIIAAALV HDLAIRWLEV TQRKLALLKM
RERREIERVT QSTREAAGRS GAGIPTKLDI YQVDIQTVDS QTRQLLRTVV GLSIIVGFWL
IWAPTFPALG ILNDITLWHH TAVVEGQEVQ KPFTLANLAL ALVLALVAFG AARNLPGVLE
IVVLRRLSLV PGSRYAITTL LRYAIGSAGI VLVFDAIGGS WSQIQWLVAA LTVGLGFGLQ
EIFANFVSGL IILFERPIRV GDVVTVGDIS GTVSRIRIRA TTVTDFDRKE LIVPNKSFVT
DRLVNWTLSD PITRITLKMG VAYGSDTTLT HQIILGVVNA NPLVLEDPPP SVYFVGFGEG
TLDFIVWAFV RELGNRYPLM HELNTAINRA LGEQGIEIPF PQRDIHVRSV NMPALNGLGS
QRAPEADCPP SQQEDSVT
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