Gene Noc_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2148 
Symbol 
ID3705340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2480253 
End bp2481011 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID637738624 
Productheat shock protein DnaJ-like 
Protein accessionYP_344138 
Protein GI77165613 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCCTA TCGTTCTGCT TGCTTTACTT GGCCTCATCG GGGCTATTTT ATTGCGCCGT 
TGGATCGCCA ACACCCCTCG TCCAGTAGCG ATACGGGCTA TGCGCCGGAT CGGTATCGCA
CTAATTGTCG GCATTTTCCT GCTTCTTACG GCCACGGGCC GGCTACCCTG GATTATGGCT
CTATTAGGGG CTCTAGCAGC AGGGGTTGCA CGGCTGCTGC CTTTACTTCG CTTTGTTCCT
TTGCTGCAAC GGCTATGGGC TTACCGCCAC GCCAACGCGG GTTTTGGCAA TCAGAGCGCC
GGCACCGCCG ACCCCCAGCA GTCCACCGCT GAGGCTCGGT TCGTGCGCAT GACCCTGGAT
CACGAAACGG GAGAGATGAG CGGAGAGGTC CTGGCAGGCA CTTTTGCAGG TAAACCAATG
GACGCGCTGG ATTTGTCCGA CTTAACCCAG TTGCTGTTGG AATGCCAGGC TGCGGATGAA
AAATCCGCGG CCCTGGTGCG AGCCTATCTA GAACGGGTTT ATGGAGAGGA TTGGCAAGCC
CAGGCTAATG CTCAAAGACA GGGGAATTCT TCCCCGGGTC AAGCGGAAAT GACACCAGAA
GAGGCCCATC AAATTCTGGG TTTGGCAGTG GGCGCCAGCG AGCAAGAAAT CATTGCCGCC
CACCGTCGGC TCATGCAGAA AGTTCATCCG GATCGCGGCG GCTCCGATTA TCTTGCTGCA
AAAATTAACC AGGCCAAAGA GATATTGCTT GGAAAATAA
 
Protein sequence
MRPIVLLALL GLIGAILLRR WIANTPRPVA IRAMRRIGIA LIVGIFLLLT ATGRLPWIMA 
LLGALAAGVA RLLPLLRFVP LLQRLWAYRH ANAGFGNQSA GTADPQQSTA EARFVRMTLD
HETGEMSGEV LAGTFAGKPM DALDLSDLTQ LLLECQAADE KSAALVRAYL ERVYGEDWQA
QANAQRQGNS SPGQAEMTPE EAHQILGLAV GASEQEIIAA HRRLMQKVHP DRGGSDYLAA
KINQAKEILL GK