Gene Noc_2119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2119 
Symbol 
ID3704922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2440472 
End bp2440855 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID637738594 
Productribosome-binding factor A 
Protein accessionYP_344109 
Protein GI77165584 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.328304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG AATTTTCTCG CGCTCGCCGG GTGGGTGAGC TATTGCAAAG AGAATTGGCT 
CGCCTGTTCC AGGAGGAGCT AAAGGATCCT CGAGTAAAGC TAGTTACCGT TTCTCATGTG 
AGGGTATCAC CGGACCTTAG ACAGGCTAAA GCCTACGTTA CTTTTCTAGG GAAAGAGGAA 
GATACTCAGG AGCAGCTAGC GGTTTTAAAT AAGGCGGCCG GATTTCTCCA GCATGGTTTA 
AGTCAGCGAG TGGAGTTACG AGTTATCCCA CGATTGCAAT TTGTTTATGA TGACTCCATC 
GAGCGTGGTA GGCGCCTAAG TGCGCTTATT GATAAAGCGG TTCAGAAAGA AACAGACGGT 
GAATCAGACA ATTCAACCGA ATAA
 
Protein sequence
MSQEFSRARR VGELLQRELA RLFQEELKDP RVKLVTVSHV RVSPDLRQAK AYVTFLGKEE 
DTQEQLAVLN KAAGFLQHGL SQRVELRVIP RLQFVYDDSI ERGRRLSALI DKAVQKETDG 
ESDNSTE