| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2116 |
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| Symbol | |
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| ID | 3704426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2436900 |
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| End bp | 2438987 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637738591 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_344106 |
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| Protein GI | 77165581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.375436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCCCA TTAAAAAGGT AATCGAGTAC GGTGATCGCT CCTTAGTTCT TGAGACCGGT
TGTATTGCGC GCCAGGCTAG CGGAGCTGTT GTTGTCCGCT ATGGTGAAAC AGTTGTGTTG
GTGACGGTAG TGGGAATGAA AGAAGCGGCT GAGGGGCGTG ATTTTTTTCC ATTGACAGTC
AATTATCAGG AAAGAACCTA TGCTGCTGGT AAAATTCCAG GAGGTTTTTT TAAGCGTGAA
GGAAGGCCCA CTGAAAAGGA AACGCTGACT TCCCGGCTAA TTGATCGTCC ACTGAGGCCC
TTATTCCCTA AAAATTTCAT TAATGAGGTG CAAGTAATTG CAACGGTTAT CTCCTCAGAT
AGTGAAAATG ATCCTGATAT TCCTTCCCTC ATTGGTGCTT CCGCCGCCTT GGCGCTTTCT
GGAATCCCTT TTACTACGCC CATTGCGGCA GCCCGGGTCG GCTATATTGA CGGCCAGTAT
GTGCTCAATC CAACGCTGGG CCAGATGGAA AAATCAGCGC TTGATTTGGT AGTTGCGGGA
ACGGAAAAGG CGGTGTTGAT GGTTGAGTCC GAGGCTCAAG AACTGCCTGA GGAAATCATG
CTGGGATCCG TCATGTTTGC TCACCAAGAA ATGCAAGTGG TAATCCAGGC TATTCGAGAA
CTAGCGGAGG AAGCTGGAAA ACCTGCTTGG GATTGGAAAC CTCCCATTGA AGAAGAAGAT
TTGAAATCGG CTGTCCAGGA AGTTGGAGAG GCCCGCGCGC AAGAAGCCTA TCAGATACGT
TCGAAACAAG AGCGGCAGGC TAGCTTGGCG GAATTACGGA ATTCCATTGT TGAAAGCCTG
GTACCCGAGG AGAATTCTCG GTGGAGTCGA GAGCAGGTGC TAGAGGCCAT TGGCGCTTTG
GAAAAGCGCT TAGTGCGTGA GCAGATTCTA TCTGGAGGGG AACGTATCGA TGGCCGTGAT
GCTACGGCTA TTCGGCCTAT TAATATTTCC ACTGGACTGT TACCTCGGAC TCATGGTTCA
GCTCTCTTCA CCCGCGGCGA GACTCAATCC TTGGTGGCAA CAACTTTGGG CACTGAACGT
GATGCTCAAG TGATTGATGC TATTGAAGGG GAGCGCCGGG AGCGTTTTAT GCTGCACTAT
AACTTCCCTC CCTATTGTGT CGGAGAAACG GGTTTCGTTG GTTCTCCTAA GCGCCGGGAA
ATCGGCCACG GCCGCCTAGC TAAGCGCAGT TTGAATGGAG TGGTTCCGGA TGAGGAAAGT
TTCCCCTATG TCATTCGGGT GGTTTCTGAG ATTACCGAAT CTAACGGTTC TAGCTCCATG
GCAACAGTGT GTGGCACCAG CCTTTCCCTA ATGGATGCGG GGGTTCCTAT TAAGGCGCCG
GTTGCGGGCA TTGCCATGGG ACTCATCAAG GAGAAGGATC GCTTCGCTGT TTTGAGTGAT
ATCCTCGGCG ATGAGGATCA TCTTGGTGAT ATGGATTTTA AGGTAGCGGG TACAGAGAAA
GGAATCACGG CCTTGCAGAT GGACATTAAA ATTGACGGTA TTACCGAGGA AATCATGCGG
ACAGCTCTGT CCCAGGCGCG TGAAGGCCGT TTTTATATCC TCCAGAAAAT GAATGAGATT
ATTTCTACCC CACGTCAAGA GATGTCCGAA TATGCTCCAC GCATGATTGT GTTCAAAATT
AATCCAGAAA AAATTCGTGA TGTAATTGGT AAAGGGGGCG CAACCATTCG GGCGCTTACC
GAGGAAACGG GTACTACGAT TGATATTGTG GATGATGGAA CGGTGAAGAT TTTTTCCGCA
GATAAGGCGG ATGGTCAAGA AGCTAAGCGC CGGGTGGAAG AGATCGTTTC TGATGTGGAA
GTGGGTAAAA TCTATGAAGG GCGGGTCTCC CGGCTGATGG ATTTTGGAGC CTTTGTCACC
ATCCTGCCTG GCAAAGACGG CTTGCTCCAT ATCTCGCAGA TTTCAGCCGA GCGGGTAAAG
AACGTGAGCG ATAAGTTATC CGAAGGTGAT GTCATTCGTG TTAAGGTTTT AGAAGTAGAT
AAACAAGGCC GAGTCCGTTT GAGTGTAAAG GCAATTGGAA ACGAATAA
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| Protein sequence | MTPIKKVIEY GDRSLVLETG CIARQASGAV VVRYGETVVL VTVVGMKEAA EGRDFFPLTV
NYQERTYAAG KIPGGFFKRE GRPTEKETLT SRLIDRPLRP LFPKNFINEV QVIATVISSD
SENDPDIPSL IGASAALALS GIPFTTPIAA ARVGYIDGQY VLNPTLGQME KSALDLVVAG
TEKAVLMVES EAQELPEEIM LGSVMFAHQE MQVVIQAIRE LAEEAGKPAW DWKPPIEEED
LKSAVQEVGE ARAQEAYQIR SKQERQASLA ELRNSIVESL VPEENSRWSR EQVLEAIGAL
EKRLVREQIL SGGERIDGRD ATAIRPINIS TGLLPRTHGS ALFTRGETQS LVATTLGTER
DAQVIDAIEG ERRERFMLHY NFPPYCVGET GFVGSPKRRE IGHGRLAKRS LNGVVPDEES
FPYVIRVVSE ITESNGSSSM ATVCGTSLSL MDAGVPIKAP VAGIAMGLIK EKDRFAVLSD
ILGDEDHLGD MDFKVAGTEK GITALQMDIK IDGITEEIMR TALSQAREGR FYILQKMNEI
ISTPRQEMSE YAPRMIVFKI NPEKIRDVIG KGGATIRALT EETGTTIDIV DDGTVKIFSA
DKADGQEAKR RVEEIVSDVE VGKIYEGRVS RLMDFGAFVT ILPGKDGLLH ISQISAERVK
NVSDKLSEGD VIRVKVLEVD KQGRVRLSVK AIGNE
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