| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2108 |
|---|
| Symbol | |
|---|
| ID | 3704418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2424013 |
|---|
| End bp | 2425230 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637738583 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_344098 |
|---|
| Protein GI | 77165573 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA TAAAAAAAGT CGTGCTGGCT TATTCAGGAG GATTAGATAC CTCCGTGATC
TTGAAATGGT TGCAGGAGAC TTATGACTGC GAGGTAGTGA CTTTCACCGC GGATATCGGC
CAAGGGGAAG AGGTGGCACC GGCGCGGGCC AAAGCGGAAA CCTTAGGGGT TAAGGAGATT
TATATCGAGG ATCTGCGCGA AGAATTCTGC CGGGATTATG TTTTTCCTAT GTTTCGGGCC
AATACCCTCT ATGAGGGAGA ATATTTACTG GGTACTTCTA TTGCTCGTCC TCTCATTGCC
AAACGTTTGG CGGAGATTGC CAGTGCCACG GGTGCGGATG CCGTTGCCCA TGGTGCTACC
GGTAAGGGTA ATGATCAGGT ACGCTTTGAA TTAGGTGTCT ATGCTCTGCA GCCTGATATC
CAAGTTATTG CACCCTGGCG AGAATGGGAT CTGACTTCGC GGGAGAAATT ACTGGCTTAT
GCGGAGACTC ATGGCATTCC GGTAGAGGGC AAACGGGGGG GCCGCTCTCC CTATTCCATG
GATGCCAATC TGTTGCATAT TTCCTATGAA GGAGGTCCTC TGGAAGATCC CTGGTTTGAG
CCCGAAGAAT CCATGTGGCG CTGGACGACT TCCCCAGAGG CATCTGCCGA TCAGGCTGCT
TATTTGGAGC TGGATTACCG CTGTGGTGAT ATTGTTGCCA TTAATGGTGA AGTCCTAAGT
CCTGCTAAAG TGTTGGAGAG CTTAAATCAG TTAGGTAGCA AACATGGCAT TGGCCGTTTG
GATTTGGTGG AGAATCGTTA TGTGGGGATG AAATCCCGCG GTTGTTATGA AACCCCAGCG
GGAACGATCA TGCTCAAAGC CCATCGGGCG CTGGAGTCCC TGACCTTGGA CCGGGAAGTA
ACCCATTTAA AGGATGAGCT GATGCCCCGT TATGCCAATC TTATTTATAA TGGTTACTGG
TGGTCTCCAG AGAGATCTTT ATTGCAGCAG CTTATTGATG GGTCTCAGGT TACGGTCAAC
GGTACGGTAC GCCTCAAGCT ATATAAGGGT AATGTGGTAG TGGTAGGACG CCGGTCAGAA
ACTGACAGTC TATTTGCCCC TGAGATCGCC ACCTTTGAAG ACGATGCGGG TGCTTATAAC
CAGCAGGATG CGGAAGGTTT TATTAAGCTT AATGCGCTCC GTCTGCGTAT TGAGGCGCTC
AAAAAACAGA CCCATTAA
|
|---|
| Protein sequence | MSTIKKVVLA YSGGLDTSVI LKWLQETYDC EVVTFTADIG QGEEVAPARA KAETLGVKEI
YIEDLREEFC RDYVFPMFRA NTLYEGEYLL GTSIARPLIA KRLAEIASAT GADAVAHGAT
GKGNDQVRFE LGVYALQPDI QVIAPWREWD LTSREKLLAY AETHGIPVEG KRGGRSPYSM
DANLLHISYE GGPLEDPWFE PEESMWRWTT SPEASADQAA YLELDYRCGD IVAINGEVLS
PAKVLESLNQ LGSKHGIGRL DLVENRYVGM KSRGCYETPA GTIMLKAHRA LESLTLDREV
THLKDELMPR YANLIYNGYW WSPERSLLQQ LIDGSQVTVN GTVRLKLYKG NVVVVGRRSE
TDSLFAPEIA TFEDDAGAYN QQDAEGFIKL NALRLRIEAL KKQTH
|
|---|
| |