Gene Noc_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2103 
Symbol 
ID3704413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2416969 
End bp2419521 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content54% 
IMG OID637738578 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_344093 
Protein GI77165568 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAGTAG CTTATCGTAA ACATGTTGCC GAACGGGAAG CAGAAGGATT ACCGCCGCTA 
CCGTTAAATG CCATGCAGGT TGCTGGGTTA GTGGAGCTTT TGAAAAATCC CCCTGCCGGT
GAGGAAGAGC TTTTGAAGGA ACTTCTGATT CAACGCGTGC CTCCCGGCGT AGATCAGGCG
GCTTATGTTA AGGCCGGATT CTTGGCGGCC ATTGCTAAAG GTGAAACCGT CTGTCCGCTC
ATCGACCGGC TTCAGGCTAC GGAACTGCTT GGCACCATGC TGGGGGGCTA TAATATCGAG
CCGCTTATGG GTCTCTTAGA GGATGAGGCC ACGGCGGCAG TGGCTGCTAA GGTATTGGCC
CATACACTTC TGGTCTATGA CCATTATCAT GACCTGTTGG AAAAAGCAAA GCGCAATGAA
TACGCCAAGC AGGTAGTGGA TTCCTGGGCT GAGGCTGCCT GGTTCACGAG CCGCCCCAAA
TTGCCGGAGG AAATCATGGC GGTCGTCTTT AAAGTTCCTG GCGAGACTAA TACCGATGAT
CTTTCACCGG CTCAGGAAGC CTGGAGCCGA CCGGATATTC CTCTTCACGC TAAGGCGATG
CTGGTCAATA AGATGCCTGA GGCTTTATCG GCTATTGCGG ATTTGAAAGG CCGGGGACTT
CCGCTAGCTT TTGTCGGTGA TGTAGTGGGG ACGGGCTCAT CTCGCAAGTC TGCTATCAAC
TCCATTCTCT GGCACATGGG TCAAGATATC CCTTTTGTGC CTAATAAGCG CCAGGGGGGG
ATAATCCTGG GGGGCAAGAT TGCCCCCATT TTTTTCAACA CCGCTGAAGA TTCCGGTGCT
CTGCCCATTG AATGCCAGGT AGAGGGCCTT AATACAGGCG ATACTGTTCG TATTCGCCCC
TTTGAGGGGA CTGTTCTCAG CGAAGCAGGC AAAGAACTTT CCCGCTTTAA GCTCCGTCCC
AGCACTTTAC CCGATGAAGT TCGTGCTGGT GGCCGGATTC CTCTGATTAT TGGGCGCGGT
TTAACCGACA AAACTCGGCA GACTTTGGGA TTGAACCCTT CTCCTTTATT TATTCGGCCA
GTGGCACCTA CCGCTAGCGG GAAAGGCTAT ACGCTAGCTC AGAAAATGGT AGGCCGGGCC
TGTGGTGTTG AAGGTGTACG CCCTGGCACC TACTGTGAGC CTAAAATGAC CACCGTGGGT
TCCCAGGATA CTACCGGTGC TATGACCCGA GATGAGCTCA AGGAGTTGGC TTGCCTGGGA
TTTTCCGCCG ATCTCGTCAT GCAAAGCTTT TGCCATACGG CAGCCTATCC CAAACCTGTC
GATGTCACCT TGCAGCACGA GCTGCCGGAT TTTATGGCTA CTCGTGGGGG AGTTGCTTTG
CGCCCCGGTG ATGGCATCAT TCACTCTTGG CTCAATCGGA TGATTCTTCC CGATACGGTG
GGGACTGGTG GAGATTCCCA TACCCGTTTT CCCATCGGGA TAAGCTTTCC CGCAGGTTCC
GGCCTGGTGG CCTTTGCTGC GGCCTTGGGG GTTATGCCTT TGGATATGCC CGAGTCGGTT
TTAGTCCGTT TCAAAGGGGA GATTCAACCG GGGATTACGC TGCGGGATCT GGTCCATGCC
ATCCCCTATG TGGCCCTTCA GCGGGGCTTG CTCACAGTGG CCAAGGCAGG CAAAAAAAAT
GCCTTTAGCG GCCGGGTTCT AGAAATCGAA GGATTGCCTC AGCTTAAAGT GGAGCAGGCT
TTTGAATTTG CCGATGCTTC TGCGGAACGA TCCGCCAATG GCTGCACCGT GAAGCTGGAC
AAAGAACCCA TCATAGAGTT TCTGAAATCC AATATCACTT TGCTGAACTG GATGATTACC
CAGGGCTATG CAGATAAGCG TACACTGGCG AGGCGTATCT CTGCTATGGA AGAGTGGCTT
AAGAATCCCA CCCTCTTGGA AGCGGACGCG GATGCGGAAT ATGCGGAAGT TATTGAAATC
AACATGAATG AGATTACCGA ACCGCTGCTG GCCTGTCCCA ACGATCCCGA TGATGTCCGG
CCCTTATCAG CCGTGGCAGG CGATGAGGTG GATGAGGTTT TTATTGGTTC CTGTATGACC
AACATTGGTC ACTACCGGGC AGCGGGCAAG ATACTGGAGG AGGGTGGCAG GATTCCTTCC
CGCCTTTGGA TCGCCCCGCC CACTAAAATG GATGCCCAGC AACTCATGGA AGAGGGCTAC
TACAGCACTT TCGGCAAGGC TGGCGCCCGT ACCGAAATGC CGGGCTGCTC TTTATGCATG
GGCAATCAGG CTCGAGTGAT GGACGGCGCT ACCGTAGTGT CCACCTCGAC TCGTAATTTC
CCCAACCGGA TGGGTAAGGA CGCCAATGTG TACTTGTCCT CGGCGGAAGT GGCGGCGGTA
ACTTCCATCT TAGGGCGCTT GCCCACGCTG GAAGAATACA AGACCCAAGT GAAAAGTATC
GCGCCCATGG CTGCTAATAT TTACCGCTAC CTCAACTTTA ACGAGATGAA GGACTATCAA
CAGGCAACGG ACCAGGCTGC CTTGGTAAAT TGA
 
Protein sequence
MLVAYRKHVA EREAEGLPPL PLNAMQVAGL VELLKNPPAG EEELLKELLI QRVPPGVDQA 
AYVKAGFLAA IAKGETVCPL IDRLQATELL GTMLGGYNIE PLMGLLEDEA TAAVAAKVLA
HTLLVYDHYH DLLEKAKRNE YAKQVVDSWA EAAWFTSRPK LPEEIMAVVF KVPGETNTDD
LSPAQEAWSR PDIPLHAKAM LVNKMPEALS AIADLKGRGL PLAFVGDVVG TGSSRKSAIN
SILWHMGQDI PFVPNKRQGG IILGGKIAPI FFNTAEDSGA LPIECQVEGL NTGDTVRIRP
FEGTVLSEAG KELSRFKLRP STLPDEVRAG GRIPLIIGRG LTDKTRQTLG LNPSPLFIRP
VAPTASGKGY TLAQKMVGRA CGVEGVRPGT YCEPKMTTVG SQDTTGAMTR DELKELACLG
FSADLVMQSF CHTAAYPKPV DVTLQHELPD FMATRGGVAL RPGDGIIHSW LNRMILPDTV
GTGGDSHTRF PIGISFPAGS GLVAFAAALG VMPLDMPESV LVRFKGEIQP GITLRDLVHA
IPYVALQRGL LTVAKAGKKN AFSGRVLEIE GLPQLKVEQA FEFADASAER SANGCTVKLD
KEPIIEFLKS NITLLNWMIT QGYADKRTLA RRISAMEEWL KNPTLLEADA DAEYAEVIEI
NMNEITEPLL ACPNDPDDVR PLSAVAGDEV DEVFIGSCMT NIGHYRAAGK ILEEGGRIPS
RLWIAPPTKM DAQQLMEEGY YSTFGKAGAR TEMPGCSLCM GNQARVMDGA TVVSTSTRNF
PNRMGKDANV YLSSAEVAAV TSILGRLPTL EEYKTQVKSI APMAANIYRY LNFNEMKDYQ
QATDQAALVN