| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2087 |
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| Symbol | |
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| ID | 3704947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2396096 |
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| End bp | 2397982 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738562 |
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| Product | V-type ATPase, 116 kDa subunit |
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| Protein accession | YP_344077 |
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| Protein GI | 77165552 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.781263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACAT CCTTATCAAT GCGGCGAGTT ACCCTTCATA TGGTCAAGGA AGAGGCTCCG
GAGGCTGCCC TTAGCTTAGC GGAAAGCGGG GTGTTTAGTC CGGAACCCCT TCCGGCCGGG
GAGGAAAGTT TGCCGGAGTG TCCCGCCGCC AGCTACCAGG CGTTATTTCA TGATGTCCAG
ATGCGTTTGC AAAAGGTGAG CGAATACCTG GGGGTCCAGG CTGCCATCCC GCCAGAAAAG
GTGCGGGCCA TCAGCGAGTC AGAGTTGGCG GCGTTTAATA AGTGGTTGGG GAGGCTCTGG
CGGCGTTGTT CTCAGTTGCA AGAAAAAGGG CGGGAACTGG ATGAGAAGAT CCGATCCATT
GGCCAATTAG ACAAGACCTT GGATACCTAT GCCCGATTGG ACGTGAATTT AGGATTATTA
CAGGGGCAAT TGCAATTTTT AGATGTTCAG CTTGGAGCGG TCCCGCAAAG TAATTTCGGC
AAACTCCAGG AGGCGGTAGG CATGGCGGGC TATATTCTTA AACCGTTTGC TGAATCTGAT
TCCGCGGCCT TGGTTGTGCT TGCCGGGGTG AAAGGAAATG AACGGCAAGT GCAAAGCGTG
CTTCGGGCGG CCGCCTACCG TCCACTTCAA CTGCCCGCCG AATTTCAGCA TCATCCCCAG
CAGGTTCGCC AACAGCTCGC GGCTCAGCGC CTGCGTTTCC AAGAGGAGCG CCTGGCGCTG
GCTCAGGAGC GGGAGTTGCT TCATAAAAAG CATGAACAGG CGTTGCATAA GGGAGCCCAG
AGGATGATTC TAGCGGCTCC CTATGCTTTT CTAGGCGCTT CTCTACGGAG CCAGGGCGGG
CTGGCGACGG TACAAGGCTG GGTACCAACG GAAAAAATAA GTTGTTTGCG GAAGACCTTG
CAAAGACGAC TAGAGCAGCG TTTTGTGCTA GAAACGCGAG ATCCGACCTT AGATGAGCGG
TTGATGACGC CTTCCCTAAT CCGGGTTCCT CGCTGGCTCC AGCCTTTTAC CGATGTAGCG
CATAATTATG GTGTGCCCCG TTATGGTGAA TTAGATCCTT CCTGGCTATT TGCTCTGACC
TTCATTGCCA TGTTCGGCAT GATGTTCGGC GATGTGGGTC ATGGCGCAGC TATCCTGGCG
GTTGGCTGGG GGTGCCGCCG TTGGTTGGGG CACTATACAC CTTTCGTACT CTCCCTGGGG
GTTTCTTCTT GCTGCTTTGG CTTTCTATAT GGCAGCGTTT TTGGTTATGA AGAGATCCTT
TCTCCCTTAT GGCTATCGCC CTTGTCCAAT CCCCAACGGA TGCTTATGGT CGCCCTTTTT
TGGGGAGTGG GGTTTATTCT TCTAGTGACG GCTATGGGGA TTCGCAACCG TTTAGCGGAG
GGGTGTTATG CCGAGGCTCT ATTAGGAGGG CGGGGACTGG CGGGGAGTTT ATTATATTTA
GGCGCCGTAT ATGGTGCGTT CCGCTGGATG GAAGAGGGCG TATTCGGGGC GATGGAGGCA
GCGGCTATTG TCTTGCCGTT TCTGGTTCTG CTGGGGTATC AATGGCATCG GTCCCAGGTT
CCCGGCTTTG GACGGGGGGT GGTCGTGCTT ATCGAGAGTT TTGAAATAAT CATGGGTTAC
TTTGCCAATA CCCTTTCTTT TCTTAGGGTC GCCGCTTTTA GCTTGAATCA TGTGGCGCTG
GCGTTGGCTG TATTTGCCCT GGCTGGGACA ATGGAGGCGG TTGGCCATTG GGTCACGGTA
GTAGTAGGCA ATCTTTTTAT TTTGATTTTA GAAGGGGCCA TTGTGGCCAT TCAGGTATTA
CGGCTGGAAT ATTACGAGGG GTTTTCCCGC TTCTTTAGTG GCGATGGTCG GGCCTTTGAG
CCGTTGATAT TAGGGCCTCT AAAATAA
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| Protein sequence | MLTSLSMRRV TLHMVKEEAP EAALSLAESG VFSPEPLPAG EESLPECPAA SYQALFHDVQ
MRLQKVSEYL GVQAAIPPEK VRAISESELA AFNKWLGRLW RRCSQLQEKG RELDEKIRSI
GQLDKTLDTY ARLDVNLGLL QGQLQFLDVQ LGAVPQSNFG KLQEAVGMAG YILKPFAESD
SAALVVLAGV KGNERQVQSV LRAAAYRPLQ LPAEFQHHPQ QVRQQLAAQR LRFQEERLAL
AQERELLHKK HEQALHKGAQ RMILAAPYAF LGASLRSQGG LATVQGWVPT EKISCLRKTL
QRRLEQRFVL ETRDPTLDER LMTPSLIRVP RWLQPFTDVA HNYGVPRYGE LDPSWLFALT
FIAMFGMMFG DVGHGAAILA VGWGCRRWLG HYTPFVLSLG VSSCCFGFLY GSVFGYEEIL
SPLWLSPLSN PQRMLMVALF WGVGFILLVT AMGIRNRLAE GCYAEALLGG RGLAGSLLYL
GAVYGAFRWM EEGVFGAMEA AAIVLPFLVL LGYQWHRSQV PGFGRGVVVL IESFEIIMGY
FANTLSFLRV AAFSLNHVAL ALAVFALAGT MEAVGHWVTV VVGNLFILIL EGAIVAIQVL
RLEYYEGFSR FFSGDGRAFE PLILGPLK
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