Gene Noc_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2084 
Symbol 
ID3704944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp2394523 
End bp2395161 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID637738559 
ProductH+-transporting two-sector ATPase, E subunit 
Protein accessionYP_344074 
Protein GI77165549 
COG category[C] Energy production and conversion 
COG ID[COG1390] Archaeal/vacuolar-type H+-ATPase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.490095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCG AGGCCAGTGT GGAAACTTTG GAAGCCGCTC TCCTGGCCCG GGCCAAGCGC 
CTGGCCGAAG AATATTTATC CCGGGCGCAA CATAGCCGTG ACCGCATTAT TGAAGAGGCT 
AATGAACGTC TGCGTCTTCG GGAAGAGCGG GAAATACTGG CGGCCAAGGC GATGGCCGAG 
CGGGTCTATC GGCGGCAGGT GCAGGCAAGC GAGCTTAAGC TCCAGGGAAA ACTGGATCGT 
CTCCGTTGGG AATGGGTACA GGCGGTAGTT CAGAATCTTA GCCACCAGTG TAAGGTGTTG 
GCCACCGATA AGTCCCGTTA TTTGCCTGTG CTCCAGCGAT TACTAGCTGC GGGGGCCGCC 
GCTATCGAGC GGGAAGAGCT GATTGCCGAG ATCAATCAGC AAGACCTGGG GCGTTTGCAA 
GAAACCTGGA AAACCTTTGC GGCGGAGGCG GTATCGGACA AGTGCGTAGT CTTATCCTCC 
GAACCGCTCA CTTGCAGTGG TGGGGTGCGG GTGGTGAGCA AAGATGGCCG CATCCGCGTG 
GATAATACTT TTGAAGGACG CCTGGAGCGG TTAGCGGAGG AACTTCATCA AAGCATTATG 
GAGCGCCTTT TTGTCCCTCC AAGCGGTCTC CATGGATAG
 
Protein sequence
MTAEASVETL EAALLARAKR LAEEYLSRAQ HSRDRIIEEA NERLRLREER EILAAKAMAE 
RVYRRQVQAS ELKLQGKLDR LRWEWVQAVV QNLSHQCKVL ATDKSRYLPV LQRLLAAGAA 
AIEREELIAE INQQDLGRLQ ETWKTFAAEA VSDKCVVLSS EPLTCSGGVR VVSKDGRIRV 
DNTFEGRLER LAEELHQSIM ERLFVPPSGL HG