Gene Noc_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2077 
Symbol 
ID3705248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2387727 
End bp2388584 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content57% 
IMG OID637738552 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_344067 
Protein GI77165542 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAG GCTTTATTGG CTTGGGCGCC ATGGGCCTTC CCATGGCCCG AAACCTGGCA 
GAAGGAGGCT TTCTTAAGGC TGTCTGGAAC AGAACCCAGG CAACAGCAGA AACGCTGGCT
CAAGAATTAA AGATAACCCA TGCACGCGAA CCGGCGGAAT TGGCCGGGGC GGTGGAGGCA
ATATTCATGT GCGTCTCCAC GGACAAAGAC GTGCTCACCC TGCTGGAAGC CCTCCTCCCC
GGTCTTGCCC CCGGCAAAAT AATAGTAGAT TTCTCCACGG TGAGCCGGGA AACCGCCCGC
CGCGCCGCAA CTATCGTCCG CAGCGAAGGC GCTGATTTTT TAGACTCTCC GGTCTCGGGC
GGCGTGGAGG GCGCCCGCAA CGGCACCTTG GCGATGATGG TGGGAGGCCG TGGAGCAACC
TTGGCAAAAG TCCAGCTAGC GCTCAAAACC CTAGCTAGCC GCATCGTGCA TATGGGCGAA
GCCGGTACCG GCCAGGCCAC CAAGGCGGTG AATCAGATCA TGGCGGCGGG AATCAACGAG
GCGGTCACCG AGGCTCTGGC CTTTGGCAAA GCCCAGGGTT TAGACATGGA AAAAGTGATT
GATGTCGTCT CCAGCGGCGC CGCTGGCAAC TGGTTTCTAG AAAAACGCGG CAAGACCATG
ACCCAGGGCA TATTTACTCC TGGTTTTAAA ATTTCCCTGC ACCATAAGGA TCTTCGCATT
TGCCGGGCAA TGGCGAAGCG GCTTGGCTTT CCCCTGCCCA TTACCGAAAT AACTCTTGCC
GATTATCAGC GCCTGCTGGA AAAAGGATTG GGCGATGAAG ACATCTCCGC TTTGTACCGT
CTTAAGCGAC CTGATTAA
 
Protein sequence
MQVGFIGLGA MGLPMARNLA EGGFLKAVWN RTQATAETLA QELKITHARE PAELAGAVEA 
IFMCVSTDKD VLTLLEALLP GLAPGKIIVD FSTVSRETAR RAATIVRSEG ADFLDSPVSG
GVEGARNGTL AMMVGGRGAT LAKVQLALKT LASRIVHMGE AGTGQATKAV NQIMAAGINE
AVTEALAFGK AQGLDMEKVI DVVSSGAAGN WFLEKRGKTM TQGIFTPGFK ISLHHKDLRI
CRAMAKRLGF PLPITEITLA DYQRLLEKGL GDEDISALYR LKRPD