| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2066 |
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| Symbol | |
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| ID | 3705237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2376951 |
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| End bp | 2378690 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738541 |
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| Product | hypothetical protein |
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| Protein accession | YP_344056 |
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| Protein GI | 77165531 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG AAATGAGACA AGAGGAGCTG AAAAGGCTTA TTCTCAAAGG CAAGGCGCAA
GGTTTGCTGA CTGAGGAAGA GTTACAAGAC TACATTATAC AGGAAGTGGA GGACAGTGAT
GAGGCTGAAA CCATGGCCCA TCTCTTTCAT CATCACCAGG GTCTCGATGA ATTTAACGAA
GCCCTAGATT CCACACTATT GCTTAAAAAT AGCTCGGAGG AGGAAATAGC TGAAACACTT
CCGACTTTAG AAGGAGAAAG CACGGGAGCA GTTAGTGATA TGGTCTATGC CTACATGCGG
GAGATGGGCG CCCATGCACT CCTTACCCGC GAGGAAGAAA TCACCTTAGC CAAGGCGATT
GAGACAGGAT TAAGCCAAAG CACCGAAGCC TTAGGTAACT GTCCCGCAGC CGTGGCTGAG
CTGGTACGTT GGGCCGAAGA AGTGGCCACA GGCAAGGGCC GTTTGAAAGA CTGGCTAACT
GGCTTTACTG AACCAGAAAT AGAAGAAACT GAGATAAAGG ACGGGAAAGA ATCAAGTTTG
GAAGCAACGA GCAAGCATCT ATCCCGAGTC CGCACTCTTT ATGGCAACCT AGAGGCAACT
TTAGCCCAAG AAGGGGTAGC AAGCCCCCGA GCACGAGAGC TGCGAAGGAA ACTTGCTCGG
GAATTTCAGT TCCTGCGCCT AATTCCGTCC AGAATTAATC AGCTGACTCA ATTGGTGCAA
GGCTGGATAA GCAAAGCCCA AACCCAGGAA CAAATCATAA GGTCCTGCTG TATCCATCAA
GGTGAGATGT CCCAAGAGGA CTTTTGGCAC AATTTTTCCA GCGGTACCAC TCATCCCCAG
TGGTTGGATG ACCTTCTAGC CCACAGTCGG ATAGACCGGC AAGGGCTGCA GACCCAAGCC
AAAACGCTTC GAGCAGCCCA AGCAGTACTG CTTCAGGTGG AAGTCGAGGC GGGACTCCCT
CTGGACGAGC TCAAGGCAAT TCACCAACGC CTGGTCCGAA GCCAATTTCA AGCGCAGCGG
GCTAAAGCAC AAATGGTGGA GGCCAATCTG CGCCTGGTGG TCTCGGTAGC GAAGAAGTAT
CGCAATCGGG GATTGACCTT TCTGGATTTG ATCCAAGAGG GGAATATCGG CTTGATGAAA
GCGGTGGACA AATTCGATTA CCACCGGGGC TATAAATTCT CTACCTATGC CCATTGGTGG
ATCCGGCAGG CAATTACGCG AGCTATTGAC GATCAGTCCC GAACTATCCG TATTCCGGTC
CATGTGATGG AGAAACTCAG CAAACTCAAC CGGGCCTCCT ACCAGCTCCG ACAGGAAAAA
GGCCGCGAAG GCCGTCCTGA GGAATTGGCC GAACGTCTCG CCCTGTCCGA GCAACAGATT
CATCGTATGC ACGAGATCGC TAAACAACCC ATCTCCTTGG AAACCCCCCT AGGTAAAGAT
GAGGACTCGC AATTAGGTGA ACTCATGGAA GACGAGCAAG TCCCAAATCC CATGGAGGTT
GCTATCACAG CCGGACTGCA GACCGGGGCC CAGCAGTTGC TCGCAGCACT TTCTCCCCGA
GAGGCCCAGG TGGTTGCCAT GCGCTTTGGG ATCGGTATGG ACACTGACCA TACCTTGGGA
GAAGTGGCCC AGCAATTTGA TTTGAGCCGG GAACGAATCC GGCAAATCGA GGCTCAAGCC
TTGGGTAAAC TGCGTCGCTT GGGCCACTCC AAGGCCCTGC GCAACTTTCT CGAAGACTAG
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| Protein sequence | MDFEMRQEEL KRLILKGKAQ GLLTEEELQD YIIQEVEDSD EAETMAHLFH HHQGLDEFNE
ALDSTLLLKN SSEEEIAETL PTLEGESTGA VSDMVYAYMR EMGAHALLTR EEEITLAKAI
ETGLSQSTEA LGNCPAAVAE LVRWAEEVAT GKGRLKDWLT GFTEPEIEET EIKDGKESSL
EATSKHLSRV RTLYGNLEAT LAQEGVASPR ARELRRKLAR EFQFLRLIPS RINQLTQLVQ
GWISKAQTQE QIIRSCCIHQ GEMSQEDFWH NFSSGTTHPQ WLDDLLAHSR IDRQGLQTQA
KTLRAAQAVL LQVEVEAGLP LDELKAIHQR LVRSQFQAQR AKAQMVEANL RLVVSVAKKY
RNRGLTFLDL IQEGNIGLMK AVDKFDYHRG YKFSTYAHWW IRQAITRAID DQSRTIRIPV
HVMEKLSKLN RASYQLRQEK GREGRPEELA ERLALSEQQI HRMHEIAKQP ISLETPLGKD
EDSQLGELME DEQVPNPMEV AITAGLQTGA QQLLAALSPR EAQVVAMRFG IGMDTDHTLG
EVAQQFDLSR ERIRQIEAQA LGKLRRLGHS KALRNFLED
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